Henckelia pumila: 140859902
Help
Entry
140859902 CDS
T11037
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
hpum Henckelia pumila
Pathway
hpum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140859902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hpum04121
]
140859902
Enzymes [BR:
hpum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
140859902
Ubiquitin system [BR:
hpum04121
]
Ubiquitin ligases (E3)
HECT type E3
140859902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
140859902
NCBI-ProteinID:
XP_073118616
LinkDB
All DBs
Position
4:10264827..10288841
Genome browser
AA seq
1028 aa
AA seq
DB search
MFFSGDSSSRKRVDLGGRSSRERDRQKLVEQTRLERNRRQWLRQQNSAALKIQKCFRGRK
VVNAERSKVREKFFMTYGECCEDVNRQCFGPDSNYLRQLLFFFNPNYVPDLSALVETCRL
LCEFVGDRVEEVVRLCAGTDYSLNRGLVEYRVKNITFACIWAIYENRNKLLWALEKSDSP
AYVFLEAVLLLADRRLPWSCNLVRYLVQRNIYSMLREIILVGKKKVQGSNGIISSLEHVL
EICISHGGLESCTCPSSDPRQSFSSQILTIPFLWQLFPHLKQIFAAPGLSENYVHQMSLC
VRDHNNVLPPDVSTDSPSYACLLENLLEAAGFTVTQPGSFTWAIYFASVATFLLQELALV
QTSNQGGNDSAMAEHEMPVDDEFKEEVLNKELRQNIFSAVGPRFLLQLTNVLLGWISPSS
GSYNGRPDDKEVAAIGAACAFLLATFNILPLEKYMTVLAYRTELVPIIWNFIKRCHENAM
WSTLSQQPANLPPDEPVWLLSLAVFCPVYKYMLTIVDNEEFYERQKPLSLVDIRFLIVIL
KQDLWNILWQNSKETSNISKSADGTYALKRHSVDGLQHRVSVVVSELLSQLQDWNNRREF
TSPRDFNADGANETFMSQAMTENTKAYDILKQAPFLVPFTSRAKIFNSQLAAMKERNNAH
AIFTRNRFKIRRNNILEDAFSQLNALAEEDLRGVIRITFVNEFGVEEAGIDGGGIFKDFM
ENITQAAFDIQYGLFKETVDHLLYPNPGSGMVHEQHLLYFHFLGTVLAKAMFEGILVDIP
FATFFLSKLKQKYNYLNDLPSLDSELYRHLIFLKHYQGDISELELYFVIVNDEYGKQTEE
ELLPGGKSLRVTNENVITFIHLVANHRLNFQIRQQSSHFLRGFQQLIQKDWIDMFNEHEL
QLLISGSMDGCDVDDLRVHTNYTGGYHEDHYVIKMFWEVIHNLSLADQRKFLKFATGCSR
GPFLGFKYLEPTFCIQRTSGNASEEAVERLPTAATCMNLLKLPPYRSKQQMEQKLLYAIS
SDAGFDLS
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgtttttctcgggggattcgtcgagcaggaaacgggtggatttaggcggtcggagctcc
agagagagagaccgccagaagctcgtggagcagacgcgattggagcggaatcgacgccag
tggttgcgtcagcagaattctgctgctcttaaaattcagaaatgcttcagaggaagaaag
gtggttaatgctgaacgctccaaagtgcgtgagaagtttttcatgacatatggagagtgt
tgtgaagatgttaataggcaatgctttggaccagattccaattatcttcgccagcttctt
ttcttctttaatccaaactatgttcctgatctttctgctctcgtggagacatgcagatta
ctttgtgaatttgtcggagatagagtagaggaagtagtgagactctgcgcaggcacagac
tactctctgaatcgtggcctggtggagtacagggtgaagaatatcacttttgcttgcatt
tgggcaatctatgaaaacaggaataagttactttgggcacttgagaagtccgatagtccg
gcatatgtcttcctagaggcagtacttctcttggctgatcgaaggcttccttggtcttgc
aacttagtccggtatctggtgcagagaaatatatactccatgctaagagaaataatcttg
gtggggaagaagaaagttcaaggttctaatggaattatctcttcactggagcatgttctt
gaaatttgtatctcccacgggggtctagaatcttgtacttgtccatctagtgatccaaga
caaagtttctcgtcccagatactgacaatccctttcttgtggcagctgtttccacatctg
aaacagatatttgctgcgccgggattgagtgaaaattatgtccatcagatgtcattatgt
gtgagagatcataacaatgtccttcctcctgatgtgtcaacagattctcccagttatgcc
tgcctattagaaaatctgttggaagctgctgggtttactgtcactcagcctggttcgttt
acttgggctatatattttgcatctgttgctacatttttgttgcaagagctagctctggtc
caaacttcaaatcaaggaggcaatgattctgcaatggctgaacatgaaatgcctgttgat
gatgaattcaaggaagaagtcttaaataaggagttgcgacaaaatattttcagtgccgta
ggtccccgttttcttctacagttgacaaatgtactgttggggtggatctcaccttcaagt
ggctcatataatggcagacctgatgataaagaggtggctgctattggtgcagcttgtgct
tttttacttgcgactttcaacattttgcccctggagaaatatatgaccgtgctggcatat
aggacagaacttgttcccattatttggaattttataaagcggtgccatgagaatgcaatg
tggtcaaccttgtctcagcagccagctaatctgcccccagatgagcctgtttggctatta
tcacttgctgtattttgtcccgtttacaagtatatgctaaccatcgttgataatgaagaa
ttttacgaacgacagaagccactctctcttgtggacataagattcttgattgttatctta
aaacaggacttgtggaacatcctttggcaaaattccaaggaaacttcgaatatctcaaag
tctgcagatggtacttatgctttgaagaggcattctgttgatgggcttcagcacagggtt
tctgtggttgtctctgaactcctatcgcagttgcaagactggaataacaggcgagaattt
acctcccccagggacttcaatgctgatggtgccaatgaaacgtttatgtctcaggcaatg
acagagaatacaaaagcttatgacatacttaaacaagctccatttttagtgccatttact
agcagagctaaaatatttaattcacaactagcagccatgaaagaaaggaacaacgctcat
gctattttcacgcggaacagattcaaaataagaagaaataatattttggaagatgctttt
agtcaattaaatgcattagctgaagaagatctccgaggagtgattcgtataacttttgtt
aatgaatttggagtcgaggaggctggtatagatggtggaggaattttcaaagattttatg
gaaaatattactcaagctgcttttgatatccagtatggactctttaaggaaaccgtggat
catctcctttatcccaatcctggatctggaatggtgcatgagcaacatcttctgtatttt
cactttcttggaactgttcttgctaaggcaatgtttgagggaatcttggtcgatatacca
tttgctacattcttcttgagcaaattgaagcagaagtataactacttgaatgacttaccc
tccttggattcagagttatatcgccatctaatttttttaaagcattatcaaggtgatatt
tcagagttggaattgtattttgttattgttaatgatgaatatgggaagcaaacagaagaa
gagctacttccgggaggaaagagcttgcgtgtcacaaatgagaatgtcattacattcatt
cacttggttgccaaccaccgactaaattttcagatacgtcaacagagttcacatttcttg
agaggttttcaacagctgatccaaaaagattggattgatatgttcaatgagcatgaactt
cagcttttgatttctggatccatggatggttgtgatgttgatgatcttcgagtgcatact
aattatacaggtggctatcacgaggatcactatgtcattaaaatgttctgggaagttatt
cataaccttagtctagcagatcagaggaagtttttgaaatttgccactggttgttcgcga
gggccttttcttggattcaagtatttggagcctactttctgcatacagaggacttctggg
aatgcatctgaagaagctgttgaacggttgccaacagcggccacatgcatgaatcttctt
aagcttccaccataccgaagcaaacagcaaatggagcagaaactgttgtatgccataagc
tctgatgctggttttgatttgagttga
DBGET
integrated database retrieval system