Henckelia pumila: 140860184
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Entry
140860184 CDS
T11037
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
hpum Henckelia pumila
Pathway
hpum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140860184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpum03019
]
140860184
Messenger RNA biogenesis [BR:
hpum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
140860184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Vps36-NZF-N
SMC_N
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
140860184
NCBI-ProteinID:
XP_073119140
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Position
4:6808367..6815933
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AA seq
620 aa
AA seq
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MPRKVNYGVDYDDDYGDGFGDDYDYDYEDDYEELLEKDETKFVSGTPDIKAKQELLQTEV
WLCPICAFDNEDSMSSCYICGVLRNPLRKINSSCIPADLVSSEKEIKTLSQLAAEAPDTS
PALVSKGRFSAEKEKQSASGSGNYPNNSFSSKNIVSRSGNTDIINEQNLASILEYKPETW
MIPDKVDDGLSQLNLAIVGHVDSGKSTLSGRLLHLLGQISQKEMRKYEMEAKQQGKGSFA
YAWALDESVEERERGITMTVAVAFFKSRRYRVVLLDSPGHRDFVPNMISGATQADAAVLV
IDASMGSFEAGLDANGGQTREHALLIRSFGVDQIIVAVNKMDVVQYSMERFDVVKHKLGT
VLRSCGFKDSSISWIPLSAMENQNLVANPSDVRFSWFKGHFLLDAIDSLQLPARDYFKPL
VMPICDVMKSQSQGQVSASGKLESGAIRTGFKVLVMPSRNLATVRSLEHNSQICDVARAG
DNVTINLHGIEGSRVAAGGVICHPDFPVPVANHLELKILVLDISTPILIGSQLEIHIHHA
KEAARVVKILTLLDPKTGKETKKSPRCLLAKQNAVIEVVLQESVCVDEYSNRRALGRVSL
RALGRTIALGVVTQIIKREE
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaaagtgaactatggagttgattatgatgatgactatggtgatggtttcggt
gatgactatgactatgactacgaggatgattatgaagaattgctggaaaaagatgagact
aagtttgtgtctggtacccctgacataaaggctaaacaggaactcctccagacagaggtg
tggctttgcccaatatgtgcttttgataatgaagatagcatgtcttcatgttacatatgt
ggagttttacgtaatcccttgagaaaaattaatagcagctgtattcctgcagatctcgtc
tcaagtgaaaaagagataaagacgctgtctcaattggctgctgaagcgccggacacctct
ccagctttagtgtcaaaagggagatttagtgcggagaaagagaaacaatctgcttcaggc
agtgggaactatcctaataattcttttagtagtaagaacattgtgtctagatctggaaac
actgacattatcaatgagcaaaacctggcatcaattctagaatataagccagagacatgg
atgattcctgacaaagtagatgatgggttgagccaacttaatctcgcaatcgttggccat
gttgattctgggaaatcaacactttcgggaaggttgcttcatcttttggggcaaatatcc
cagaaggaaatgcgcaaatatgaaatggaagccaaacaacagggaaaagggtctttcgct
tatgcatgggcactagatgaaagtgttgaagaaagggagaggggtataactatgactgtg
gctgttgcttttttcaaatctagaagatatcgtgttgtactacttgattctcctggccat
agagactttgttccgaacatgatatctggagcaacccaagcagatgctgcagttcttgta
atagatgcttccatgggttcatttgaagctggcctggatgctaatggagggcaaacgagg
gaacatgcactgctaattagaagctttggagtggatcagataatagttgcagtcaacaaa
atggacgttgtgcaatactctatggaacgatttgatgttgttaagcataaactaggaacg
gttcttcgctcttgtgggttcaaggattcttctatatcatggatcccactaagtgccatg
gaaaaccaaaacttggtggctaatccttctgatgtacggttctcttggtttaaggggcat
tttttgttggatgcaatagattccctccaactgcctgcgagagattacttcaagcctctt
gttatgcctatatgtgatgttatgaaatcacagtcacaaggtcaggtctctgcaagtggt
aaattagagagtggagctattcgaactggtttcaaggtacttgttatgccttcaagaaat
ttagcaactgtccgttctttggaacacaattctcagatctgtgatgtcgcaagagccggt
gataatgttactataaatttgcatggtattgagggcagtcgcgtggcagctggaggtgtt
atctgccaccctgatttcccagttcctgttgcaaatcacctggaactcaaaattcttgtg
ctggatatatctactccaatcttaattggttcccagttggaaattcacatacaccatgca
aaagaggctgctcgggtggtgaagatattgacactgctagatccaaagactgggaaagag
acaaagaaatccccaagatgtttattagctaagcagaatgcagtaattgaggtggttctg
caggaatccgtttgtgtggatgagtacagtaaccgtagagctctgggaagggtgtcccta
agagcattaggaaggactattgctcttggtgttgtaactcaaattattaagagggaagaa
tag
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