Henckelia pumila: 140860208
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Entry
140860208 CDS
T11037
Name
(RefSeq) ubiquitin receptor RAD23d-like
KO
K10839
UV excision repair protein RAD23
Organism
hpum Henckelia pumila
Pathway
hpum03420
Nucleotide excision repair
hpum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
140860208
09124 Replication and repair
03420 Nucleotide excision repair
140860208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
hpum03051
]
140860208
03400 DNA repair and recombination proteins [BR:
hpum03400
]
140860208
Proteasome [BR:
hpum03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
140860208
DNA repair and recombination proteins [BR:
hpum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
140860208
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
Rad60-SLD
UBA_7
UBA_Ucp12
UBA_RAD5A
Dsc3_N
Rad60-SLD_2
NUP58_M
UBA_3
Phasin_2
Ubiquitin_4
TECR_N
Crinkler
Motif
Other DBs
NCBI-GeneID:
140860208
NCBI-ProteinID:
XP_073119188
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All DBs
Position
4:33439017..33443950
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AA seq
406 aa
AA seq
DB search
MKICVKTLKGTHFEIEVKSDETVADVKKIIETVQGSDVYPAAQQMLIHQGKVLKDNTTLE
ENKVAEKSFVVIMLTKSKASSSGAATASTTPASTTQPASNTPPPTQPVTAGPVPVSTIAP
PQSAPESVPAPTPALAPAPAPAPAPAPAPAPAPAPAPAPASSETDVYGQAASNLVAGNNL
EGAVQQILDMGGGCWDRDTVIRALRAAYNNPERAVEYLYSGIPEQAEVAPAVQAPAGGQP
VNPPIQATQPAVVPSTGPNSNPLDLFPQGLPNMGSNASAGALDFLRNSPQFQSLRALVQA
NPQILQPMLQELGKQNPQLVRMIQEHQADFLRLINEPVEGEGNILEQMAEAMPQAITVTP
EEREAIERLEAMGFDRALVLEVYFACNKNEELAANYLLDHMHEFDE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttgcgtgaagactctgaaggggacacacttcgagatcgaagtgaaatccgat
gagacagtggccgatgtgaagaaaattattgaaacggttcagggttctgatgtataccca
gctgctcagcagatgctgattcatcaagggaaggttcttaaagataatacaacactggag
gaaaacaaagttgcggaaaaaagttttgtggtgattatgttgaccaagagcaaggcatca
tcaagtggagctgcaactgcgtctaccactccagcgagtacaacccaacctgcaagcaat
acccctcctccaacacagcctgtgactgctggtccagtacctgtatcaactattgcacct
ccacagtcagctcctgaatctgttcctgctcctactcctgcccttgctcctgctcctgct
cctgctcctgctcctgcccctgcccctgcccctgcccctgcccctgcccctgcccctgct
tcctcagagacagatgtgtatggtcaagcggcttcgaatcttgttgctggaaataatttg
gagggtgctgttcaacagatccttgatatgggtggtggatgttgggatcgagacacagtt
attcgtgcactgcgtgctgcttataacaatccggagagagcagttgaatacctttattct
ggaattccagagcaagcagaagttgctcctgcggtgcaagcacctgctggtgggcagcca
gtgaatcctccaatccaggctacacagccagcagtagtaccttctactggacccaattct
aatccattggacctatttccacagggcctccctaacatgggctcaaatgcaagtgccggt
gccctagatttccttcgcaacagtccacagtttcaatcactgcgagccctggtgcaagcc
aatccacaaatcttgcagcccatgcttcaagaactagggaaacaaaatccacaattagtt
cgaatgatacaagagcatcaggctgattttctacgcttaataaatgaacctgtcgagggg
gaggggaacatattagaacaaatggctgaagcgatgccgcaggccatcactgtcacacca
gaagaacgtgaagcaattgaacgtcttgaagcgatggggttcgatcgagctttggtattg
gaagtatattttgcgtgcaacaagaacgaggagctggctgcaaactacctcttagatcat
atgcacgagtttgatgagtga
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