Henckelia pumila: 140860223
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Entry
140860223 CDS
T11037
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hpum Henckelia pumila
Pathway
hpum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140860223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpum03019
]
140860223
03110 Chaperones and folding catalysts [BR:
hpum03110
]
140860223
03029 Mitochondrial biogenesis [BR:
hpum03029
]
140860223
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hpum04147
]
140860223
Enzymes [BR:
hpum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
140860223
Messenger RNA biogenesis [BR:
hpum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
140860223
Chaperones and folding catalysts [BR:
hpum03110
]
Heat shock proteins
HSP60 / Chaperonin
140860223
Mitochondrial biogenesis [BR:
hpum03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
140860223
Exosome [BR:
hpum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140860223
Exosomal proteins of other body fluids (saliva and urine)
140860223
Exosomal proteins of breast cancer cells
140860223
Exosomal proteins of colorectal cancer cells
140860223
Exosomal proteins of bladder cancer cells
140860223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
140860223
NCBI-ProteinID:
XP_073119228
LinkDB
All DBs
Position
4:145763421..145769623
Genome browser
AA seq
576 aa
AA seq
DB search
MYRAAAAIASPSRSSTSRSLVKVCSRVVSIRNFVAKDVNFGIGARAAMLAGVDELAEAVK
VTMGPKGRTVIIEKSRRKPQVTKDGVSVAKSINFLDKAKNVGADLVKQVAEATNKVAGDG
TTCATVLTQAIFKEGCKSVAAGVNVMDLRKGINMAIDAVIADLKSRALMISTPEEITQVA
TISANGESEIGEMIARAMEKVGKEGVITVEDGNTMYNELEVVEGMKLARGYISPYFVTDE
KTKKCELENPLILIHEKKISDMEALVRVLELAVNRNRAVLIVAEDVDSESLTMLVLNKHR
GGLKVCAIKSPGFGDNRRANLEDLAILTGGEIISEEYGTSLNKVQVDMLGSAKKVTVSVD
DTIILHGGGDKKLIEERCEQLRTAFETSTAVFDKEKAQERLSKLSGGVAVFKVGGASEAE
VGERKDRVTDALNATRAAVEEGIVHGGGIALLYATRSLKDLQTANEDQKRGVEIIENALK
APTFTIASNAGVDGALVVGKLLEQDDLNLGYDAASGEYVNMVKAGIIDPVKVIRTALLDA
ASVSILLTTTEAAIVDSKGEKNPLRNRMPNMDDMGY
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtacagagccgccgctgctattgcttcgccatccaggtcatctacctccaggagcttg
gtcaaggtatgtagtagagttgtttctatcagaaattttgttgccaaggacgttaacttt
gggatcggagctcgggcagctatgttagctggagttgatgagctagccgaagcagtaaaa
gtgacaatgggtccaaagggtcgcactgtaattatcgagaaaagtagaaggaaaccccag
gtgacgaaggatggtgttagtgtagccaaaagcataaattttttggacaaggcaaaaaac
gtcggtgcagatcttgtgaagcaggttgcggaggcaacaaataaggttgctggtgatggt
accacttgtgctactgtgctcactcaggcaatattcaaagaaggatgcaaatcagtggct
gccggtgtaaatgtgatggacctgcgaaaaggtatcaacatggctattgatgctgttatt
gcagatttgaagagcagagcactcatgattagtacccccgaagaaattacacaggtggcc
actatctctgcaaacggtgaaagtgaaattggtgaaatgatagcccgggctatggagaaa
gttgggaaggaaggagtaattacagttgaggatggaaataccatgtataatgagttggaa
gtggtggaagggatgaagctagcccgtggttatatctctccttattttgttactgatgaa
aaaaccaaaaaatgtgaacttgaaaatcctttaatcctaatccacgagaagaaaatttcg
gacatggaagcacttgtcagagtattggaactggccgtgaatagaaaccgagctgtgttg
attgttgcagaagacgtggatagcgagtcacttactatgcttgtcctcaacaagcatcgt
ggaggtttgaaggtttgtgctatcaaatctcctggttttggagataacagaagggcaaat
ttagaagatcttgccattctcacaggaggagagattataagtgaagaatatggaactagc
ctgaacaaagttcaggttgatatgcttggttctgccaaaaaggtaacagtttcagttgat
gacactataattctacatggaggaggggataagaaactgattgaagaaaggtgcgaacag
ttaagaactgcctttgagactagtactgcagtgtttgacaaggagaaagcacaagaaagg
ctgtcaaaattgtctggaggtgttgcagttttcaaggttggaggggctagcgaagcagaa
gttggagaaaggaaggatagggtaacagatgctcttaatgcaacaagggctgctgtggag
gagggcattgttcatgggggtggcattgctcttttgtatgccactagaagtctgaaggac
cttcaaactgcgaatgaggaccaaaagagaggcgtggaaataattgagaatgctctaaag
gcgcctacttttactatagcctcaaatgctggtgttgatggggctcttgttgtaggcaag
ctattggaacaagatgatctgaatttgggctatgatgctgcatcaggtgaatatgttaac
atggtgaaggctggaattatagatcctgtgaaagttattagaacagctttgttagatgct
gcaagtgtctccattctattgactactaccgaggcagcgatcgtggactctaaaggagag
aaaaatcccctcagaaatcgcatgccgaacatggatgacatggggtattga
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