Henckelia pumila: 140861530
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Entry
140861530 CDS
T11037
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
hpum Henckelia pumila
Pathway
hpum03082
ATP-dependent chromatin remodeling
hpum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140861530
03083 Polycomb repressive complex
140861530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hpum03036
]
140861530
Chromosome and associated proteins [BR:
hpum03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
140861530
Histone modification proteins
HAT complexes
HATB complex
140861530
HDAC complexes
Sin3A-HDAC complex
140861530
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
140861530
PRC2.2
140861530
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
140861530
Heterochromatin formation proteins
Other heterochromatin formation proteins
140861530
Chromatin remodeling factors
NuRD complex
140861530
NuRF complex
140861530
NuRF complex (fruit fly)
140861530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
WD40_RFWD3
eIF2A
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
140861530
NCBI-ProteinID:
XP_073120653
LinkDB
All DBs
Position
4:complement(145678532..145685269)
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AA seq
452 aa
AA seq
DB search
MKDRTAEHSVEERYSQWKSLVPVLYDWLANHNLVWPSLSCRWGPKVEQATYKNRQRLYLS
EQTDGTVPNTLVIANVEIVKTRVAAAEHISQFNEESRSPFVKKSKTIIHPGEVNRIRELP
QNNNIVATHTDSPDVLIWDVERQPTRQPVLGATASRPDLILTGHRDNAEFALATCPMEPF
VLSGGKDKSVVLWSIHDHISSLAADPGTHKSPGSKGSAVNGKAADGSIVQPRGIFQGHED
TVEDVQFNPSSSQEFCSVGDDSCLILWDARSGSSPIAKVEKAHNADLHCVDWNPNDLNLI
LTGSADNTVRMYDRRSLTSGGVGSPIHIFEGHTAAVLCVQWSPDKASVFGSAAEDGMLNI
WDHGKVGNAGKEKSDYPPGLFFRHAGHRDKVVDFHWNAADPWTIVSVSDDGEKTGGGGTL
QIWRMIDLIYRPEEEVIAELDKFKSHLLSCSS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatagaacggcggagcatagcgtggaggaacgttacagtcaatggaaatcccta
gttcccgttctctacgactggctggccaatcacaaccttgtttggccgtctctctcttgc
cgatggggaccgaaggtggaacaagcaacttacaagaaccgtcagcggttatatctttca
gaacagaccgatggcacagttccaaatacacttgtcatagctaacgttgaaatagtgaaa
actagagttgcagcagcagagcacatttcacagttcaacgaagaatcccgttcacctttt
gtaaaaaagagcaagaccatcatacatcctggagaggtgaatcgtattagggaattgccg
cagaataacaacattgtggccactcatacagacagtcctgatgttcttatttgggacgta
gagagacagcctactcgccaacctgttttaggtgctacagcatctcgtcctgatctgata
ctgactggtcatcgagataatgctgaatttgctctagccacatgtcctatggaacctttt
gtgctctctggaggtaaggacaagtctgtggttttgtggagtatccatgaccacatatca
tcattggcagcagatccaggaactcataagtctcctggctctaagggaagtgcagtcaat
ggtaaagctgctgacggctccattgtccaacctcggggtattttccaagggcacgaggat
accgtagaagatgtgcagtttaacccatcaagctcgcaggagttctgcagcgttggtgat
gattcttgccttatactgtgggatgcgagaagtggttcttctcccatagcaaaggttgaa
aaggctcacaatgccgatcttcattgcgttgattggaatcctaatgatttaaatctgatt
ttgactgggtctgctgataatactgttcgaatgtatgatcgtcgaagtcttacctctgga
ggagttggatcccccattcacatatttgaaggtcatactgctgctgttctttgtgtccag
tggtctccagacaaggcatctgtctttggcagtgctgcagaagatggcatgttgaatatc
tgggatcatggaaaggtgggtaatgctggaaaagaaaaatcagattatccccctggatta
ttttttcgacatgcggggcacagggataaggtggttgatttccactggaacgctgcggat
ccatggacgattgttagtgtgtctgacgatggagaaaagactggagggggaggtacattg
cagatatggcgaatgattgacctgatttatcgtccagaagaagaggtcatcgcggagctg
gataagttcaaatctcacttactgtcatgctcctcttga
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