Henckelia pumila: 140861769
Help
Entry
140861769 CDS
T11037
Name
(RefSeq) TATA-binding protein-associated factor BTAF1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
hpum Henckelia pumila
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpum03021
]
140861769
Transcription machinery [BR:
hpum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
140861769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
HEAT_ECM29
TOR1L1_N
TPR_Trm732_C
HEAT_GCN1_C
HEAT_2
HEAT_GCN1
HEAT_MROH2B_C
ARM_TBCD_2nd
HEAT_GCN1_C_2
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
140861769
NCBI-ProteinID:
XP_073120900
LinkDB
All DBs
Position
1:complement(109007075..109027668)
Genome browser
AA seq
2037 aa
AA seq
DB search
MAQQSSRLHRLLTLLDTGSTQATRFSAARQIGEIAKSHPQDLIALLNKVSQYLHSKKWDT
RVAAARAVGAIAENVKHTSLAELSSCLDMKLSEAGISATFNEVVIWPNYHSKIVAGTSFR
SFDLNKVLEFGALLASGGQEYDIGNDNCKNPRERLSRQKQNLRRRLGLDVCEQFMDVSDM
IRDEDLVLHKFNYPINGIASHYYASQPPHNINKLVTSMAPTSRSRRPSARELNLLKRKAK
SNSKDQSKGWPKDGSTEATQSHDAVAPRTTSLDSSAAQKLVTDTISDDDNIENDGDGGWP
FQSFVEQLLIDIFDPVWEVRHGSIMALREILTYQGACAGILLPEFSCAGSSGFNLENVRR
ERETNFDLQVSADDSEPVLKRPKLEDVSSSVVESIDGDLNACSKIEGEDDRGDVFPVHAN
GETDGGFVKGEPQSGVDSTSHCGLDVKESNDYSEDKELIEKMTIIKRIPQNSELMNLVME
GRTSWLRNCEFLQDCAIRFLCVLSLDRFGDYISDQVVAPVRETCAQALGAVLKYMHPTLV
RETLNILLQMQRRPEWEIRHGSLLGTKYLVAVRQEMLHDLLGPVLPACKTGLEDPDDDVR
AVAAEALLPTSAAIVSLKGPILHSIVMLLWDILLDLDDLSPSTSSVMNLLAEIYSQEQMI
PKTFSMSGSREKLELDLNESSHMDDHDEGTSSLENPYMLSTLAPRLWPFMRHSITSVRLS
AIRTLERLLEAGHRRSITDEASSFWPSFIVGDTLRIVFQNLLLESNEEILLCSERVWNLL
VLCLMEDLENAAKLYFSSWVELATTPYGSPLDASKMFWPVALPRKSHFKAAAKIKTVKLE
NENYKNKSSESMETTSAEPNGDAPASSSKIIVGADLDISVTCTRVVTATALGVMASRLSG
ASLQYVVDPLWKGLNSLSGVQRQVVSMVLISWFKELKGLLKSDEVFAGISNNFRHCLLDL
LVCSNPAFPTKDSLLPYAELSRLCGKMRNEASQLYYATESSGLFSDLLAGTKVDLENMTA
DDAVNFASQLSFASNINTGVESDGKNLFEELESLKQNLLTTAGYLKCVQNNLHLTVSALL
AAAFVWMSELPTKLNPVILPIMASVKREQEEILQNKAAESLAELIHQCIERKPGPNDKLI
KNLCTLACMDPRETPQAEVLSSVEIIEDQDLLSFGSSSIRSKSRVQVLSPGEDRSRLEGF
ISRRGSELALKYLCLKFCDYLFDRLPKIWDCLVEVLKPCNIEGQTLEDEKLIDQAIASVK
DPQILINNVQVVRSISPLLDASLRPKLLTLLPCIFKCVRHSHIAVRLSASRCITAMAKSM
TLDVMGMIIENVIPMLSDVSSVHARQGAGMLVSLLVQGLGLEMVPYAPLLVVPLLRCMSD
CDHSVRQSVTHSFAALVPFLPLARGVSLPDGLAERLSRNNEDAQFLEQLVDNSHIDDYKL
SFELKVTLRRYQQEGINWLAFLKRFNLHGVLCDDMGLGKTLQASAIVASDVTEHIAANNG
KDLLPSLIICPSTLVGHWVYEIEKFIDPSLLTTLQYIGSAPERLSLRLQFDKHNVIVTSY
DVVRKDIDYLRQIYWNYCILDEGHIIKNSKSKVTVAVKQLKAQHRLILSGTPIQNNVLDL
WSLFDFLMPGFLGTDRQFQATYGKPLLAARDPKCSAKDAEAGALAMEALHKQVMPFLLRR
TKDEVLSDLPEKIIQDRYCDLSPIQLKLYERFSGSHVKQELTSIVKLNEDAGGAPKASAH
VFQALQYLLKLCSHPLLVLGERIPESLLPMLSEHIHANADISTELHKIVHSPKLVALQEI
MEECGIGVDASNSEGNITFGQHRVLIFAQHKAFLDIIEKDLFQTLMKNVTYLRLDGSVQP
EKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRL
GQRKVVNVHRLIMRGTMEEKVMSLQKFKVSVANAVINSENSSMKTMNTDQLLDLFTSAEG
KKGARTSTSSNGVDTDPKLPGRGKGLKAILGGLEDLWDQSQYTEEYNLSQFLTKLNG
NT seq
6114 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacagtcgtcccggctgcatcgtctgcttactttactggacactggttcaacc
caagcgacaaggttttcagcagcaaggcagataggggaaatcgccaaatcgcatcctcag
gaccttattgccctcttgaacaaggtgtctcaatatttacatagtaaaaagtgggacacc
agagtagctgcagctcgtgctgtgggggccattgcagaaaatgtcaaacatacatctttg
gccgaactctctagttgccttgatatgaaattgtcagaagctggtatttctgctaccttc
aatgaagtggtgatttggcccaattaccattctaaaattgttgctggcacttcctttaga
agtttcgatctgaataaagtgttggagtttggggctctgttggcatctggtggtcaggag
tatgatattggaaatgacaactgcaagaatcctagggaacgattgagccgacagaaacaa
aaccttcggcgtcgattaggtttagatgtgtgtgagcaatttatggatgtcagtgatatg
ataagagatgaggacctcgttttgcacaagtttaattaccctataaatggaattgcttcc
cattattatgcgtcacaaccgccgcataatattaacaaacttgtgacaagtatggcgccc
acctcaagatccaggaggcccagtgccagggagctgaatctcttaaaacgtaaagcaaaa
agtaattcaaaagaccaatccaaaggctggccaaaggatgggtccacagaagcaacccaa
tcacacgatgcggtggcacccaggactacttccctggactcatcggctgctcaaaagtta
gttacagataccatttccgatgatgataatattgaaaatgatggagatgggggctggcct
tttcaaagttttgttgaacaactcctcattgatatctttgaccctgtttgggaagttcgt
catggcagtatcatggctcttagagagatattgacctatcaaggagcttgtgcggggatc
cttctgccagagttcagttgcgcaggttcatcgggatttaatttggaaaatgtgagaaga
gagagggaaactaattttgatttgcaagtctcagctgatgattcagagccagttttgaag
agaccaaagttggaggatgtttctagttcagtggttgaatccattgacggagatctaaat
gcttgttcaaaaattgaaggtgaagatgatagaggagatgtttttcccgtgcatgcaaat
ggagaaactgatggtggttttgtgaagggggaaccacaatctggtgttgacagcacaagc
cattgcggattagatgtaaaggagtcgaatgattattctgaagataaggaattgatagag
aagatgacgataataaaaaggatacctcaaaactctgaattgatgaacttggttatggag
ggtaggacttcttggctgagaaattgtgaatttctgcaagattgtgcaattcgcttcctg
tgtgtcttgtccctggatagatttggagactacatctctgatcaagtggtggcaccggtg
agggaaacctgtgctcaagccttaggtgctgtgctcaagtacatgcatccaacattagta
cgagagacactgaatattttgttgcaaatgcagcgtagaccagagtgggagattcgccat
gggagtcttttgggtaccaaatatctagttgctgtgcggcaggaaatgctccatgatctg
cttggacctgttcttcctgcttgtaaaaccgggctggaggatcctgatgatgatgtacga
gccgttgctgcagaagctttattaccgacatcagctgcaattgtttctctcaagggtcca
atattgcattctattgttatgctgctctgggacattttgcttgacctggacgatttaagc
ccctcaaccagcagtgtaatgaatctattagcagaaatttattcccaggagcagatgatt
ccaaagacttttagtatgtcgggttccagggaaaaactggaacttgaccttaacgaaagc
agtcatatggatgatcatgacgaagggacgagttctctagagaacccttatatgctgtca
acgttggcaccacgattatggccatttatgagacatagtataacatcagttcgcttgtct
gcaatccgcaccttggaacgtctgcttgaagctggtcataggaggagcatcactgatgaa
gctagctcattttggccttcttttatcgttggcgacactctaaggatagtgttccagaat
ttactgctcgaatcaaatgaggaaattctgctgtgctcagagagagtttggaatctccta
gtcctttgcctgatggaagatttagaaaatgctgcaaaattgtacttttcttcatgggta
gagctggcaacaactccatatggatctccactggatgcttccaagatgttttggcctgtt
gccctgcctcgtaaaagtcatttcaaagctgcagctaaaattaaaacagttaagcttgaa
aatgaaaattacaaaaataaatcctcagaatccatggaaaccacgtcagcagagccaaat
ggagatgctccagcaagttcatcaaaaattattgttggtgctgacttggacatctcagtg
acttgtacaagagttgttacagcaaccgctttaggagttatggcttccaggttaagtggt
gcatccttgcagtatgtagttgacccattgtggaagggattgaattctttatctggagtt
cagcgtcaggtggtttcaatggttcttatatcctggtttaaagaattgaaaggacttttg
aaatcggatgaggtttttgctggcatttcaaataattttcggcattgtttattagattta
ttagtttgcagtaaccctgcttttcctacaaaggattctcttcttccttatgctgaactc
tctagattatgcggtaagatgcgaaatgaggccagtcagttgtattacgctacagagtca
tctggcttgttcagtgatcttcttgcgggcaccaaggtggaccttgaaaatatgactgcc
gatgatgcagtgaattttgcatcacaactctcatttgcgagcaatataaacactggagtg
gaatctgatggaaagaatttatttgaggagttagagtctctaaagcaaaatcttttgact
actgccggatatctgaaatgtgttcagaataatttgcatcttactgtctcggctttacta
gccgctgcatttgtatggatgtcagagcttcctacaaaactcaatccggttatcttgcct
attatggcttccgttaagcgagaacaggaggaaattctgcaaaataaggctgctgaatca
ctggcagaactcatacatcagtgtattgaacgcaaaccgggtcccaatgacaagctaatc
aagaatctgtgtactttagcatgtatggatcctcgtgaaacaccccaagcagaggtcctg
agttctgtggaaattattgaagaccaagatcttctgtccttcggaagcagtagcattcga
tcaaagtcaagagttcaggtgctatctcctggtgaagaccgatcaaggcttgaaggtttc
attagtcgacgaggatctgaactagcattgaaatatctatgcttgaaattttgtgattat
ttgttcgacagacttcctaagatctgggattgccttgttgaggtgcttaagccttgtaat
atcgagggacagacattggaagatgagaaactgattgatcaagctattgcttccgttaaa
gatcctcagattttgataaacaatgtacaagtggttcgttctatttctcctctactggat
gcaagtctaagaccaaaacttctcactcttctaccttgcattttcaaatgtgtgcgccat
tctcatattgccgtaagattatctgcatcaagatgcattacggcaatggccaagtctatg
actttggatgtcatgggtatgatcattgagaatgttattcctatgttaagtgatgtgtca
tctgtacatgctagacaaggagctggcatgctagttagtttgcttgtacaggggttgggg
ttggaaatggtcccatatgctccgttgttggttgttcctcttttgaggtgcatgagcgac
tgtgatcattctgtcagacagagtgtgacacatagttttgctgccctagtaccttttctt
ccgttggcgcgtggtgtctctctgcctgatggcttggctgaacgattgtctagaaataat
gaagatgcacagtttctggagcaactagttgacaattctcacattgatgattacaagctc
tcctttgaactaaaagtgactttgaggaggtatcaacaggaaggtataaattggctagct
tttttaaagcggtttaatcttcacggtgttttatgtgatgatatgggtcttggtaagacc
cttcaagcatcagcaattgtggcatctgatgtaacagagcacattgctgcaaacaatggc
aaggacttgctaccatctttgattatatgtccatcaacacttgttggacactgggtctat
gagatagagaagtttattgatccttctctgttaacaacacttcaatacattggttctgct
cccgagcgtttgtctttgcgattgcaatttgataagcataatgtcattgtgacatcatat
gatgtcgtccgcaaagatattgattatctcagacagatttactggaactactgcatcctg
gatgaaggacatattattaaaaattcgaaatccaaagtcacagttgctgtgaaacagttg
aaggctcagcatcgcctcatactgagtggaacaccaatccagaataatgtgttggatctg
tggtctctatttgacttcctcatgccggggtttcttggaactgatagacagtttcaagct
acttatggtaaacccctgttggctgcacgtgatcctaaatgttcagcaaaggatgcggaa
gctggtgctcttgccatggaagcattgcacaagcaggtcatgcccttcctcttgcgccga
acaaaagatgaagttttatctgatctgccagagaagatcattcaagacagatattgtgat
ttaagtcccattcaactgaagttgtatgaacgattttctggttcacatgttaaacaagaa
cttactagcattgttaagctaaatgaagatgcaggaggggcacctaaggcatctgctcat
gttttccaggcactccaatacttgttaaaactctgtagtcatccattacttgtccttggt
gaaagaattccagagtcactcttgcctatgctatcagaacacattcatgccaatgctgat
atctctacagagctccataaaatagtacattcccctaaactagtcgctcttcaggagata
atggaagagtgtggaataggtgtagatgcatcaaattctgagggcaacatcacttttggc
cagcatagggttctaatatttgctcagcataaagccttcttggacattattgagaaagac
ttgtttcagactctcatgaaaaatgttacatatttgcggttggatggatcggttcaacct
gaaaaacgctttgaaattgttaaagctttcaactcagacccaacaattgatgttctgctg
ctcacgacacatgtgggagggcttggtttgaacttgacatcagctgatacccttgttttc
atggagcatgactggaatcctatgagagatcatcaggcaatggacagagcacacaggtta
ggccagcggaaagttgttaatgtccaccgtctgatcatgagaggcaccatggaagagaaa
gttatgagcctccaaaagttcaaagtttcagtggcaaatgcggtcataaattcagagaac
tccagcatgaaaacgatgaatacagatcaattacttgatctgtttacttctgcggaaggc
aaaaagggagcaagaacgtctacatcttcaaatggagttgacacggacccaaaattacct
ggtaggggcaagggactaaaagctattcttggcgggctagaagatctttgggatcagtca
cagtacaccgaggaatacaatctaagccaatttttaacaaaactaaatggctga
DBGET
integrated database retrieval system
