Henckelia pumila: 140862961 Help Entry 140862961         CDS       T11037                                  Name (RefSeq) vacuolar sorting protein 18   KO K20181   vacuolar protein sorting-associated protein 18 Organism hpum  Henckelia pumila Pathway hpum04148   Efferocytosis Brite KEGG Orthology (KO) [BR:hpum00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     140862961  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:hpum04131]     140862961 Membrane trafficking [BR:hpum04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     140862961    Hops complex     140862961 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pep3_Vps18 Clathrin zf-rbx1 zf_RING_Vps8 zf-RING_11 zf-RING_UBOX Nup54_57_C zf-RING_Vps41 zf-RING_2 zf-ANAPC11 Occludin_ELL zf-C3HC4 Motif Other DBs NCBI-GeneID:  140862961 NCBI-ProteinID:  XP_073122100 LinkDB All DBs Position 4:161684382..161697374 Genome browser AA seq 987 aa AA seqDB search MEHRRHVFSVDLLERYAAKGKGVITCMTSGNDVIVLGTSKGWVIRHDFGVGDSFDIDLSV GRSGEQSIHRVFVDPGGSHCIATVVGGGTSDTFYTHAKWAKPRILSKLKGLVVNDVAWNK QHITEASTREILLGTDDGQLYEIAVDEKDKREKYIKFLFQLNELPEAFTGLQMETAHIHN GTRYYVMAVTPTRLYSFTGIGSLDSVFASYANRAVHFMELPGEIPNSELHFFIKHRRAIY FAWLSGAGVYHGGLNFGAQHSSPNGDENFVENKALFDYSKLGEGVLVKPSSLSVSEFHFL LLIGNKVKVVNRISEQIVEELYFDQTPDAVSRGILGLCSDASAGLFYAYDQNSIFQVSVN DEGRDMWKVYLDLKEYAAALANCRDALQRDQVYLMQAETAFTSKDFLRAASFYAKINFIL SFEEITLKFISIGEQDALRTFLLRKLDNFAKDDKCQITMISTWATELYLDKINRLLLEED TELDSGSSEYQSIITEFRAFLSDCKDVLDEATTMKLLESYGRVDELVFFASLKEQYEIVV HHYIQLGEAKKALRVLQKSNVAIDLQYKFAPDLIMLDAYETVESWMMTKDLNPRKLIPAM MRYSSEPHAKNETHEVIKYLEYCVHRLQNEDPGVHNLLLSLYAKQEDESTLLRFLQCKFG KGNPNSPEFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQVDVELAMAEADK VEDDEDLRKKLWLMVAKHVIEQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFALI DDFKEAICASLEDYNEQIEKLKQEMNDATHGADNIRNDISALAQRYAVIKRNEECGVCRK KILDASGDYRMARAYTSVGSMAPFYVFPCGHSFHSHCLIAHVTKCTTETHAEYILDLQKQ LTLLGDEPRKEMNGSLKEEDPIMSMTHGEKIRSRLDDAIASECPYCGDLMIREISLPFIL PEETYEVESWEINPHNAGTQKSISLTV NT seq 2964 nt NT seq  +upstreamnt  +downstreamnt atggagcatcggcggcatgttttctccgtagatttgctggagaggtacgcggcgaaggga aaaggagtgatcacgtgtatgacttccggtaatgacgtcatcgtgctggggaccagtaaa ggatgggtcattcgtcacgattttggcgtcggcgattcttttgatattgatctttctgtg ggtagatctggggagcagtcaatccacagggtttttgttgaccctggaggtagccactgt attgctactgtagttggtggaggaacttccgatacattttatacgcatgcgaagtgggct aagcctcgaattttgagcaaattgaaaggtcttgttgtgaatgatgttgcctggaataag cagcatataacagaagcttccaccagggaaattcttcttggtacagatgatggccaactt tatgaaattgcagtagatgagaaagataagagagaaaaatacatcaaatttttgtttcag ctgaatgaacttccagaagctttcacgggtttgcagatggaaacagcacatatacacaat ggaactagatattacgtcatggccgttacacccaccaggctttattctttcacaggaatc ggttcgttggattctgtttttgccagttatgcaaaccgtgcagttcacttcatggaactg ccaggtgaaattccaaacagtgaactacactttttcataaaacacagaagagcaatatat tttgcatggctatccggagcaggagtttatcacggtggtcttaattttggagcacaacac agttcacctaatggggatgagaactttgtagagaacaaggctctcttcgactattcgaaa ttaggtgaaggtgtattggtcaagcctagttcactttcagtatcggagttccatttcctt ctcctgattgggaacaaagttaaggtcgtgaatagaattagtgaacagatcgtcgaggaa ctttattttgatcaaacacctgatgcagtttcaaggggtattctaggtttatgtagtgat gcatctgccgggcttttctatgcgtacgaccagaattctatttttcaggtatctgtaaat gacgaaggccgagacatgtggaaagtctatttagacttgaaggaatatgctgcagcattg gcaaattgtcgtgatgctctccaaagagatcaagtatatctgatgcaggctgaaactgct tttacttctaaggattttctcagagccgcatcattttatgcgaagatcaactttattctg tcatttgaggagatcactttgaagtttatcagcataggggaacaggatgccttaaggacc ttcctgttgcggaagcttgataattttgcgaaggatgacaaatgccaaattacaatgatt tccacatgggcaactgaattgtatttggataagattaatcgactactattggaagaggat actgagttggatagtggtagctctgagtatcaatccattatcacagaatttcgagccttt ttgagcgactgcaaggatgtattggatgaggctaccaccatgaaacttcttgagagctat ggtagagtagatgaattggtattctttgctagtcttaaagagcagtatgagattgtggtt catcattatattcagcttggagaagcaaagaaagcactgcgagttcttcagaaatccaat gttgccatagaccttcagtacaagtttgctccggatctcatcatgctagatgcatatgaa actgttgaatcgtggatgatgacaaaggacctgaacccaagaaaacttattcctgcaatg atgcgatattcaagtgaaccgcacgcaaagaatgaaactcatgaagtgattaaatatttg gagtattgtgttcatcgcttgcagaatgaggatccaggtgtacataatttgttgctctcg ctgtatgctaagcaggaggatgagagcactcttctgcggttcctgcaatgcaaattcgga aaagggaatcccaattcccctgaattcttctatgatccaaaatatgccttgcgtctttgc ctcaaggaaaaacggatgcgtgcttgtgtccatatatatagtatgatgtctatgcacgaa gaggcagttgctcttgctttacaggttgatgtagagcttgccatggctgaagccgataaa gttgaagatgacgaagacttgaggaagaaactttggcttatggttgctaagcatgtcatt gaacaagagaagggcacaaaacgggagaatatccggaaggcaatagcatttctcaaagaa actgatggacttctaaagatcgaagatatcttaccctttttcccagattttgcattgatt gatgatttcaaggaggcaatctgcgcatcacttgaagattataacgagcaaatcgaaaaa ctcaaacaagagatgaatgatgctactcatggtgctgacaatataaggaatgatattagt gcacttgcacaaagatacgctgtaataaagcggaatgaggaatgtggggtttgccgaaag aaaatattagatgcatctggtgactaccggatggccagggcttatacttcagttggatca atggcacctttttatgtgtttccttgtggacattcctttcattcacattgtttgatagcc catgtcactaaatgcactactgaaactcacgctgaatacatactagatttgcaaaagcag ttgactttactgggtgatgaacctaggaaggaaatgaacggcagcttgaaagaagaggat ccaataatgagcatgactcatggagagaagattcgatcacggttggatgatgcgatagcc agtgaatgcccgtattgtggtgacttgatgatccgtgaaatatctttacctttcatcctc ccggaggaaacatatgaggtagagtcatgggaaataaacccacataatgctggaacccag aagagcatatcattaaccgtgtga

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