Henckelia pumila: 140863116
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Entry
140863116 CDS
T11037
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
hpum Henckelia pumila
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpum03400
]
140863116
Enzymes [BR:
hpum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
140863116
DNA repair and recombination proteins [BR:
hpum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
140863116
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
140863116
NCBI-ProteinID:
XP_073122388
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Position
4:35974415..35980399
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AA seq
608 aa
AA seq
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MKIVTYNVNGLRHRISQYTSLRRLLDSLDADVICFQETKLSRHELRADLVRAEGYESFFS
CTRTSDKGRTGYSGVATFCRVKSAFSSDEVALPVSAEEGFTGVLGNSPGFGSRKSECPLI
VEGLEDFSTIELLKVDGEGRCIVTDHGHFVLFNVYGPRAGCDDAERIQFKLNFFNILQRR
LESLLRQGRRVFVVGDLNIAPAAIDRCDAGPNFEKNEFRTWFRSLLVRNGGQFSDAFREK
HPDRREAYTCWSTSSGAEEFNFGSRIDHILIAGPCFHENQNESHSFVNCHIEECDILEQF
KRWKPGNTPRWKAGSNVKLEGSDHVPVYICLMEIPNVPLHNTPSLSSRYCPEVYGFQKTL
VSMLERKQPAKDVSLSGGSSSILEDSIASKCCSQLMKRSLQSFSASSSTLRKHEDLSSVD
ISEGFCEKSSNDFNGTEEVSKSFSTLESNKKARKSQLSQLSLKSYFKKTVGVIDNSDSIC
ADKKLSQAEMSSPCFEVNETLDEGAQCDSEMQSEQGPSIEEDDSSQSSEKERTGLALVEW
QRIQQFMQTSIPLCKGHKEPCVPRVVKKPGPNIGRRFYVCARAEGPASNAEANCGFFKWA
TSNSKVKR
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtgacgtacaacgtgaatgggctgaggcatcgaatctcacagtacacctct
cttcgcaggctgctcgattctcttgacgccgatgttatatgtttccaggagacgaagcta
tcgaggcatgaattgagagcggatttggtgcgggcggaaggttatgagtcctttttctct
tgcactcgcacttctgacaaagggcgaactggatactctggagtagcgacattttgccgt
gtcaaatctgcattttccagcgacgaagttgctttgccagtttctgcagaggagggcttc
actggagttcttgggaattccccggggtttggatcacggaaaagtgaatgtccattaata
gtggaaggcctagaagatttttccactatagagcttctgaaagttgatggtgaaggacga
tgtatcgtaactgatcatgggcatttcgttcttttcaatgtttatggtcctagagctgga
tgtgatgatgcagaaagaattcagttcaagctcaattttttcaacatacttcagagaaga
ttggaatcccttttgaggcaaggacggagggtgtttgttgtaggggatctcaacattgct
cctgctgctatagaccgttgtgatgctggaccaaatttcgagaaaaatgagtttagaact
tggttcagatctttgctggtgagaaatggagggcaattttccgatgcttttagagagaaa
catcctgacagaagagaagcctacacatgttggtcaactagttccggtgcagaggaattc
aactttgggtcacgtattgaccacattcttatcgctggaccatgctttcatgaaaaccaa
aatgagagtcatagctttgtgaattgccatattgaagagtgtgacatattagaacagttc
aaacgttggaaacctggcaacacacctaggtggaaagcggggagtaatgtcaaattggaa
ggctcagatcatgttccggtctatatatgcttgatggagatccccaatgtaccattgcat
aatacaccttcactgtctagtagatattgtccggaggtctatggtttccagaagacacta
gtgtcaatgttagagagaaagcaacctgccaaagatgttagcttgtccggaggatccagt
tctattttagaagacagtattgctagtaaatgttgcagtcagctaatgaaaagatcttta
caatcctttagtgcatcttcatctaccttgaggaagcatgaagatttatcttcggtcgat
atttctgaaggcttctgtgaaaaatcatcaaatgactttaatggcactgaagaggtatct
aaatcattttccactttggaaagtaataaaaaagcaaggaaaagccagttgtctcagctt
tcactcaaatcatatttcaagaaaacagtcggtgtaattgataattcagacagtatctgt
gctgataagaagcttagtcaagcggaaatgtcgagtccttgctttgaagtgaatgaaact
ctcgatgaaggtgctcaatgtgactctgagatgcagtcagaacaagggccttcaattgaa
gaagatgattcctctcaatcttcagaaaaagagaggactggtttggccttagtcgagtgg
caaaggattcagcaatttatgcaaactagcatacctctttgtaagggccacaaggaacct
tgtgttcctcgagttgtgaagaaacctggacctaatatagggcgacgattttatgtctgt
gcgcgtgctgagggacctgcatctaatgctgaagcaaactgtggttttttcaaatgggca
acttcaaactcaaaggtgaaacgatga
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