Henckelia pumila: 140863124
Help
Entry
140863124 CDS
T11037
Name
(RefSeq) cyclic nucleotide-gated ion channel 18
KO
K05391
cyclic nucleotide gated channel, plant
Organism
hpum Henckelia pumila
Pathway
hpum04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
140863124
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hpum04040
]
140863124
Ion channels [BR:
hpum04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
140863124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
140863124
NCBI-ProteinID:
XP_073122401
LinkDB
All DBs
Position
4:complement(28017000..28019758)
Genome browser
AA seq
701 aa
AA seq
DB search
MNRIFTTPASHLRHIRRTLTHHPSAAATASGEPNSLSILWHYQILDPNSDIVNLWNHIFL
ITCLISLFIDPLYFYLPYVGGQVCMSTDNQASVLITYFRTLSDLFYVLHMLMKFRMAFVA
PSSRVFGRGELVMDPHEIAMKYLKSDFIIDLTATLPLPQIVIWYVIPATKTNGTGHADNT
LALIVLIQYVPRLFVIFPLNQRIIKTTGFIAKTAWAGAAYNLLLYMLASHVLGASWYLAS
IGRQHSCWDQGCKEEFTSVPPCNLNFLDCESPEIGSIERQHWLNSTSVLSRCDASNDDSD
FKFGMFADAFTTEVASSIFIEKYIYCLWWGLRNLSSYGQNLTTSTYLGETTFCIVLCIGG
LILFARLIGDMQTYLQSMTVRLEEWRIKRRDTEEWMRHRQLPPDLQERVRRFDQYKWLAT
RGVHEESILRSLPVDLRREIQRHLCLNLVRRVPFFAQMDDQLLDAICERLVSSLSTEGSY
VVREDDPVNEMLFIIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALVPNSSNLP
SSTRTVKTLTEVEAFALKAEDLKFVALQFKRLQSKKLQHAFRYYSHQWRTWGACFIQAAW
RRFKKKKLAKELALQENFYYMSNYNHDQDGDSDDGFSADSSSVDSPSSARHLGATILASK
FAANTKRGAGVQKVQIADPVSSSLKMPKLFKPDEPDFFEDV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaatattcaccacgccggcatcccacctccgccacatccggcgaacgctaacc
caccacccctctgccgccgccacagcctccggcgagcccaattccctcagcatcctatgg
cattaccaaatcctcgaccccaacagcgacattgtcaatctctggaaccacatcttcttg
atcacctgtctcatctccctcttcatagaccccctctatttctacctcccctacgtcggc
ggccaagtctgtatgtccaccgataaccaagcctctgttttgatcacttattttcggacc
ctttccgatttattctacgtcctacacatgttgatgaagtttcggatggcgtttgtggct
ccaagttctcgggttttcggccgcggggagcttgttatggatccccatgagattgccatg
aagtatcttaaatctgatttcataatcgatctaaccgccactttgcccttgcctcagatt
gtgatctggtatgtaattccagctacaaaaaccaatggaaccggtcatgcagacaacacc
cttgctcttattgttctaatccaatatgttcctcggctgtttgtcatttttcccctgaat
cagaggataattaaaaccacgggttttatcgccaagactgcttgggctggagctgcatat
aatttgcttctatacatgctagccagccacgtattaggagcttcatggtatctggcgtcg
atagggcggcaacattcttgttgggatcaagggtgtaaagaagaattcaccagtgttcca
ccttgtaatctgaatttccttgattgtgagagtcctgaaatagggagcatcgagcggcag
cattggctcaattcgactagtgtgctctcacgttgcgacgcaagcaatgatgattctgat
ttcaagtttgggatgtttgccgatgcttttacaactgaagttgcttcctcaattttcatt
gagaaatacatttattgcctttggtggggcttaagaaatttgagttcgtatggacagaat
ttgacgactagcacttatcttggagagacgacgttctgcattgttttgtgcattggtggt
ctgattctgttcgcccgtttgatcggagatatgcagacttatttgcaatcaatgacggtg
agacttgaagagtggagaattaagagaagggacactgaagaatggatgaggcatcggcaa
ctgcctccagatttgcaagagcgtgttcgtagattcgatcagtataaatggctcgcgaca
agaggagtccacgaagaatccatcttacggtccttgcctgtggaccttaggcgtgagatt
caaaggcatctatgccttaaccttgttcgccgagttccatttttcgcacaaatggatgac
caacttctcgatgccatctgcgaacgtctcgtttcttccttgagtacagaaggcagctac
gttgttagagaagatgatccggtgaacgagatgttgttcatcatcaggggacaactcgag
agctccacgacaaatggcggacgttccggattcttcaattcgatcacccttcgacctggt
gacttctgtggagaagaattgctcacatgggctctagtaccaaattcctcaaaccttcct
tcttcaacacgaaccgtcaaaactctaacagaagtcgaagcatttgcgcttaaagcagaa
gaccttaaattcgtggcccttcagtttaaacgtcttcagagcaagaagcttcagcatgca
tttaggtactactctcatcaatggaggacatggggtgcttgtttcattcaagcagcatgg
cgaagattcaagaaaaagaagctagccaaggagttggctctacaagagaatttctactac
atgtctaactacaaccacgatcaagacggagattcagacgatggatttagtgctgatagt
tcatcggttgatagcccaagcagtgctcgacatctaggagccacaattttggcttcaaaa
tttgctgccaacaccaaaaggggagctggtgttcagaaggttcagattgctgatcctgtg
tcatcgagcttaaagatgccgaaactgtttaaaccagatgaacctgatttcttcgaggat
gtttag
DBGET
integrated database retrieval system
