Henckelia pumila: 140863160
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Entry
140863160 CDS
T11037
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hpum Henckelia pumila
Pathway
hpum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140863160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpum03019
]
140863160
03110 Chaperones and folding catalysts [BR:
hpum03110
]
140863160
03029 Mitochondrial biogenesis [BR:
hpum03029
]
140863160
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hpum04147
]
140863160
Enzymes [BR:
hpum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
140863160
Messenger RNA biogenesis [BR:
hpum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
140863160
Chaperones and folding catalysts [BR:
hpum03110
]
Heat shock proteins
HSP60 / Chaperonin
140863160
Mitochondrial biogenesis [BR:
hpum03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
140863160
Exosome [BR:
hpum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140863160
Exosomal proteins of other body fluids (saliva and urine)
140863160
Exosomal proteins of breast cancer cells
140863160
Exosomal proteins of colorectal cancer cells
140863160
Exosomal proteins of bladder cancer cells
140863160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
TAL_FSA
Motif
Other DBs
NCBI-GeneID:
140863160
NCBI-ProteinID:
XP_073122470
LinkDB
All DBs
Position
4:154766684..154770508
Genome browser
AA seq
584 aa
AA seq
DB search
MLLPFSSQLVFHNYLSFTGIDGKSNSCWLWSRHNVKQKSLVVKAGPKRVAFDRKCREALL
SGINKLADAVSVTLGPKGRNVVLSESESLKVVNDGVTIAKAIELPDPIENIGALLIREVA
IKTNGSSGDGTTTSIILAREMIQSGLLAITSGANPVALRKGMEKTVKELVKSLKENSYAV
RRSEDIEAVASISAGNDEVIGKLIAEAMDKIGPDGLISVESSSSSDTSVIVEEGMKIDKG
YMSPHFITNKDKSIVEFENAKILVTDLKISEVREIVPLLEKAIQLSIPLLIIAEDISRQV
LEILVVNKMQGVLNAAAVKCPGFGEAKKAILQDIALMTGADFISGDLGLTLEGATSDQLG
IAQKVTITSNSTTIIADPSTKAEIQARILQIKKDLAETDSKYLAEKLSARIAKLCGGVAI
IKVGAHTEMELEDRKLRIEDARSATFAAMAEGVVPGGGATYVHLSRKIPLLKKVFQDPDE
KIGADIVGMALLAPAKFIAANAGVDGDVVVEKILSSDSGVGYNAMNGRYEDLIAAGVIDP
CRVSRCALQNAVSIAGMILTTQAILVEKTRKTKPVLPHVPGISP
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttccgttttcttcgcagctagtcttccacaattatctttcgtttacgggaatc
gatggaaaatcaaattcttgctggctgtggagcaggcacaatgtgaagcagaagtctttg
gtggtgaaggcaggtccaaagagagtagctttcgacagaaagtgtagagaagcgttgctt
tcgggaatcaataaacttgctgatgctgtatcggtgaccctgggacctaaagggcgaaat
gtggttctttcggaatctgagtcacttaaagtggttaatgacggtgttactattgccaaa
gccatagagctccctgacccaattgaaaatataggagcattgctaatccgagaggttgct
atcaaaacaaacgggtcttctggggacggtacaacaacttcaattatactggctcgagaa
atgattcaatctgggcttctggctatcacttctggtgccaaccctgtagctttgagaaaa
ggaatggagaaaacagtgaaagaattggtcaaaagtttgaaggaaaatagttatgctgta
agacgaagcgaagacattgaagctgtagcttcaatatctgcgggaaatgatgaggttatt
gggaagttaattgctgaagcgatggataaaattggtcccgatggattgatatctgttgaa
tcttcttcatcatccgacacatcagtgatagttgaagaaggaatgaagatagacaaaggg
tacatgtctcctcatttcatcaccaacaaggacaaatctatagttgagtttgaaaatgcc
aaaattcttgtgactgatctgaagatatccgaagtgagagagattgttcctttgctggaa
aaggccatacagttgagtatccctttgctgataattgctgaagacatttctcgacaagtg
ctggaaattctagttgtcaataaaatgcaaggcgtgcttaatgctgctgcggtaaaatgt
cctggttttggagaagctaaaaaagctattttgcaagatatcgcgcttatgacaggagct
gattttatctctggagatttgggcctgactcttgaaggtgcaacttccgatcagcttggt
atcgcacaaaaagtaaccataacgagcaatagcactactataattgctgacccgtctacc
aaagctgaaatacaggcaagaattttacagataaagaaggatctggctgagactgatagc
aaatatctggcagaaaagctgtctgcaagaattgcaaagctctgtggtggggtcgcaata
attaaggtaggagctcatacggagatggaacttgaagatcggaaactaagaattgaggat
gcaagaagtgccacttttgctgccatggctgaaggcgtggtgcctggtggtggagcaacc
tatgtacatctctctagaaaaatacctttactaaagaaggtttttcaagatccagatgag
aaaattggtgcagacattgttggaatggcccttctcgcacctgcaaaattcattgcagca
aatgcaggggttgatggagatgtagtcgtagagaaaattttatcttctgactcgggagtt
gggtataatgcgatgaacgggagatatgaagatctcatagctgctggggtcattgatcct
tgccgtgtttcaagatgtgctcttcagaatgctgtctcaattgctggtatgatccttacc
actcaagccattctggtggagaaaactaggaaaacaaagccagttctccctcatgtacct
ggaatatcaccttaa
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