Henckelia pumila: 140863275
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Entry
140863275 CDS
T11037
Name
(RefSeq) polyprotein of EF-Ts, chloroplastic isoform X1
Organism
hpum Henckelia pumila
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_TS
S1
EF-Ts_N
S1_RRP5
UBA_7
UBA
RNase_II_C_S1
Microp_apicomplexa_15
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
140863275
NCBI-ProteinID:
XP_073122686
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Position
4:complement(111063080..111068684)
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AA seq
1092 aa
AA seq
DB search
MAPVLPNSINISLTTGNTFITKRNNFIPRCNIPRNNSRQLLPAQNYILPLSTSLRLFPQF
RIGFRSPIKIRTCIACATGTDVAVEEAELSTADSDAAEVSGESSAKSNVLPAQSKRARPV
RKSEVPPVKNEQLIPGATFTGKVRSIQPFGAFVDFGAYTDGLVHVSNLSDSYVKDVASVV
TVGQEVTVRLVESNMETGRISLSMRENDDGKQQKDNSRPTKKTGQKSNDRKDDAKKKSKF
VKGQDLAGTVKNLTRSGAFISLPEGEEGFLPTSEEPDEGFGSLMGGGSSLEIGQEVNVRV
LRISRGQVTLTMKKEEDAAELDTKLSKGGVVHTATNPFVLAFRSNKAISEFLDEMKIEDG
PVVSAKQDSTDTLDKEEELETVPDTSTSAEIKTETFKEFEASSVAPSDDGSLSPEDQITE
EPTPIETKESNEEVEISGNIADGTLSSEIVQESADEEADDTIVKGEGQSPYDILSSEIVQ
ESAVKEADDTIVKGEGQSPDPDTSVPSATQEESESSSEITAQTLLSENTGVEKDTDDVTA
INEDSGEKPEHTAPLTAQEEEENGEPSPEENFTSTESQVTTEVTEKLGDDITATEVQSHT
SAGKEEDAEAGRQQIENVSISSGPTDASENGTTKAAISPALVKQLREETGAGMMECKKAL
AETGGDMVRAQEYLRKKGLASADKKASRATAEGRIGSYIHDSRIGVLIEVNCETDFVARG
DIFKELVEDLAMQVAACPQVQYLNTEDVPKEIVHNERELEMQREDLLSKPEQIRSKIVDG
RIKKRLEDMALLEQPFIKDDKVVVKDWVKQTVSTIGENIKVKRFVRYNLGEGLEKKSQDF
AAEVAAQTAAKPATTSIKQEPAAASETIETTETPPKAVVSAALVKQLREESGAGMMDCKK
ALAETGGDLEKAVEYLRKKGLSTADKKSSRLAAEGRIGSYIHDSRIGVLIEVNCETDFVG
RSQNFKELVDDLAMQVVASPQVQYVSIEDIPESIVNNEKQLEMQREDLQSKPENIREKIV
EGRVLKRLGELALLEQPFIKNDSLFVKDLVKQTVAALGENIKVRRFIRFTLGEVSATKSV
DETEATVENTVA
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggctccggtacttccaaattccatcaatatttcccttacaaccgggaatacctttata
accaagaggaacaactttatacccagatgcaacatccctagaaacaatagcagacaatta
ttaccggctcaaaactacattttgcctttatcaacatctttgagattatttccccagttt
cgaattgggtttagatctccaatcaagattagaacatgtattgcatgcgctactgggact
gatgttgcggttgaggaggcagagttatctactgctgatagtgatgcagcagaagtaagt
ggagaatcttctgccaaatcaaatgtccttcctgctcaatccaagcgtgcaagacctgtt
agaaagagtgaggtgcctcctgtgaagaatgaacaacttattcctggagcaacttttact
ggaaaagttaggtctatccagccgtttggtgcttttgtcgattttggagcttatacagat
gggcttgtacatgtttcaaatctgagtgatagctatgtgaaggatgtagctagtgtagtt
accgttggtcaggaggtgacagtaagactagttgaatcaaacatggagacggggcgaata
tctttgtccatgcgcgaaaatgatgatgggaagcaacagaaagataattctagacctact
aaaaagaccggtcaaaaatctaatgataggaaagatgatgcgaagaaaaagtcaaagttt
gtgaagggacaagatcttgcagggactgtaaaaaatctaactagatctggggctttcatt
tctcttcctgaaggggaggaagggttcctgcctacatcagaggaaccggatgaagggttt
ggaagcctaatgggtggtggttcttcgttggaaattggtcaagaagttaatgttcgagta
ttgcgcatcagtagaggacaggtaacattgacaatgaaaaaggaagaagatgccgcggag
ttggataccaagctcagcaagggtggtgtagtacatacagcaactaacccttttgtgtta
gctttccgtagtaacaaagccatctctgaatttttggatgaaatgaaaattgaggatgga
ccagttgtcagtgctaagcaggattccacagatactttggacaaggaagaggagctagaa
acagtccctgatacttctacaagtgctgaaataaaaactgaaaccttcaaagaatttgag
gctagctctgttgcaccaagcgatgatggaagcctgtctcctgaagatcagataactgag
gaaccgacaccaatagaaacaaaagaaagtaatgaagaagtggagatatctggaaacatt
gctgatggcacgttgtcgtcagagattgttcaagaatctgcagacgaagaagctgatgat
accattgtgaaaggtgaaggacaaagtccttatgacatattgtcgtcagagattgttcaa
gaatctgcagtcaaagaagctgatgataccattgtgaaaggtgaagggcaaagtccagat
ccagacacttcagttccttcagccacacaagaagaatcagaatcatctagtgaaataact
gcacagaccttgttatccgagaatacgggtgtggagaaggacacggatgatgtgacagca
ataaatgaagattctggtgagaaaccagaacacactgcacctttgaccgcacaagaggaa
gaagagaatggtgaacctagccccgaggaaaatttcacatctacagaaagtcaggttact
acagaagttactgaaaaactgggagatgatataaccgcgactgaagtgcaatcacatact
tctgctggcaaagaggaagatgcggaagctggccgtcagcaaattgaaaatgtctctatt
tctagtggcccaactgacgcttctgaaaatggaacaacgaaagctgctatatccccagct
ctagtcaagcaattacgtgaggaaacaggagctggaatgatggaatgtaagaaagctcta
gcagaaactggaggagacatggttagagctcaggaatacttgcggaagaaaggtttagca
agtgcagataagaaagctagtagggccacagcagaaggaagaattggttcatatatccat
gatagcaggattggtgtcctgatagaggtaaactgtgagacagattttgttgctcgaggt
gacattttcaaggaattggttgaggacttggccatgcaagtggctgcatgccctcaagta
caatatctcaacactgaagatgttccaaaagagattgttcataatgagagagaattagaa
atgcagagggaagatctgttatcaaagccggagcagattagatccaagattgttgatggg
aggataaagaagagactggaggatatggccttactggagcaaccttttatcaaagatgat
aaggtagtggtgaaggattgggtgaagcaaaccgtttcaacgattggagagaatataaaa
gtgaagagatttgtgcgctacaacctgggtgaaggattggaaaagaaaagccaagatttt
gctgcggaggttgctgctcaaactgcagcaaaacctgcaaccacatccataaagcaagag
cctgctgctgcttctgaaactattgaaaccactgaaacgcccccgaaagcagtggtttca
gctgcacttgtgaaacaactgcgagaagaatctggagctggaatgatggattgcaagaaa
gctctagccgaaactggaggagacctcgagaaggcagtagagtaccttagaaagaagggt
ctttcaactgcagacaaaaaatctagccgacttgcagctgagggaagaattgggtcttat
attcatgattctcgcattggtgttttaattgaagtaaattgtgaaaccgactttgtgggt
agaagtcagaacttcaaagaactggttgatgatctcgcaatgcaagttgtggcttctcca
caagtacaatacgtatccattgaagatatcccagaaagcattgttaataacgagaagcaa
ttggagatgcaaagggaagatcttcagtctaagcccgagaacataagagagaagattgtt
gagggaagagtcctaaaaaggcttggggagcttgctcttttagagcagcccttcataaaa
aatgatagtttgtttgtgaaggacttggtaaagcagactgttgctgccctcggggagaac
attaaggtcaggcggtttatccgtttcactctgggtgaggtaagtgccacaaagtcggta
gatgaaactgaagctacagtcgaaaacacagttgcataa
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