Henckelia pumila: 140863334
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Entry
140863334 CDS
T11037
Name
(RefSeq) uncharacterized protein
KO
K07573
exosome complex component CSL4
Organism
hpum Henckelia pumila
Pathway
hpum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140863334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpum03019
]
140863334
Messenger RNA biogenesis [BR:
hpum03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
140863334
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
140863334
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
ECR1_N_2
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
140863334
NCBI-ProteinID:
XP_073122791
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Position
4:41351962..41355259
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AA seq
194 aa
AA seq
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MEGETFVTPGELLGKAAELRAGRGAYVSTHDKTVYASLTGFISITPALPESNDQRPMVEV
TGHKAHGPVPEPGAIVIARVTKVMAKMASADIMCVGPKSVREKFSGTIRQQDVRATEIDK
VDMHSSFQPGDVVKALVLSLGDARSYYLSTAQNELGVVSAESVSGAAMVPISWTEMQCPL
TGQIEQRKVAKVGA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgaaactttcgtgacgccaggtgaattactgggaaaagccgccgagttgaga
gcaggaagaggagcctacgtctcaacccatgataaaaccgtgtacgcttccctcactggg
ttcatctctatcacccctgctctcccggaatcgaatgaccagaggccaatggtggaggtg
acgggtcataaggcgcatggtccagttccagaacctggtgctattgtcattgcaagagta
acaaaagtgatggctaaaatggcttcagcagatataatgtgcgtgggtcccaagtctgta
agagaaaagttttccggcactattagacaacaagatgtcagagcaactgagattgacaaa
gtagatatgcactcctcatttcagcccggtgacgttgttaaagcattagttctctccctc
ggcgatgcacgatcttattatttatcaaccgcccaaaatgaacttggtgttgtttctgct
gaaagtgtcagtggtgcagcaatggttcccattagctggacagaaatgcagtgtccctta
acaggacaaatcgagcagagaaaagttgccaaagttggagcttga
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integrated database retrieval system