Henckelia pumila: 140863343
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Entry
140863343 CDS
T11037
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like isoform X1
KO
K11088
small nuclear ribonucleoprotein D3
Organism
hpum Henckelia pumila
Pathway
hpum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140863343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpum03019
]
140863343
03041 Spliceosome [BR:
hpum03041
]
140863343
03032 DNA replication proteins [BR:
hpum03032
]
140863343
Messenger RNA biogenesis [BR:
hpum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
140863343
Spliceosome [BR:
hpum03041
]
Complex A
U1 snRNP components
Sm proteins
140863343
U2 snRNP components
140863343
Complex B
U1 snRNP components
140863343
U4/U6.U5 tri-snRNP components
140863343
Complex C
U2 snRNP components
140863343
DNA replication proteins [BR:
hpum03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
140863343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
140863343
NCBI-ProteinID:
XP_073122806
LinkDB
All DBs
Position
4:110918655..110923693
Genome browser
AA seq
132 aa
AA seq
DB search
MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMVECEDNWNCQLENITYTAKDGKVSQL
EHVFIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSALGVGRGRAVAMRARAQAAGRGA
VPGRGAVPPVRR
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggagtttggggataccagtgaagttgcttcacgaggcgtcggggcacattgtg
acggtggagcttaagagcggcgagctttatcgaggaagcatggtggagtgcgaggacaat
tggaattgccagctcgaaaacatcacttatactgctaaggatgggaaggtttcacaactt
gagcatgttttcattcgtggcagcaaagtcaggttcatggtgattccagatatgcttaag
aatgctccaatgtttaaacgtttggaagctaggatcaagggaaaaggttcagctcttgga
gttggacgtgggcgagctgttgccatgcgagctagagctcaggctgctggccgtggagct
gttcctggtagaggtgctgtgccacctgtccgtaggtga
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integrated database retrieval system
