Henckelia pumila: 140863651
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Entry
140863651 CDS
T11037
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
hpum Henckelia pumila
Pathway
hpum03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
140863651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpum03009
]
140863651
Ribosome biogenesis [BR:
hpum03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
140863651
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Utp12
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_ACSF4
Beta-prop_VPS8
CFAP251_N
EIF3I
WD40_Gbeta
Beta-prop_Vps41
Beta-prop_IFT140_1st
PROPPIN
NBCH_WD40
Beta-prop_Aladin
Motif
Other DBs
NCBI-GeneID:
140863651
NCBI-ProteinID:
XP_073123333
LinkDB
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Position
4:complement(86283268..86290501)
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AA seq
595 aa
AA seq
DB search
MGSSHIRDIFTAFSPTLDLFALSFGDGRIKIWDTVKGQVQTEFTDIASSESTGVFGKDER
GHLSMDYTCMKWLSLDRKKKRKLGSSLLVLGTGGGDVLALDVSAGQMKWCINNCHPGGVN
AISFPANGSSIYTAGVDGMVCEINSMSGDLLGKFRAMSRSISSLYVSPDGKMVATAAGQL
KIFNSSDCKKLQKFSGHPGPVRCLIFSEDGRYLLSSAMGERYVAIWRIDGSKEKSAYLFL
TMDHPAVFLDCKCFNSGDEDDIVLSVLAISEMGICYFWHANTMDELRNSKPTKICITCDE
GQKHKGALASVFAAKLQTISKPACGHVFLAYGLLIKPLFNKVVVHSGTDINLNISHDGIL
LPVNQSQKPKKASDLRNRVTALDRSNAEGGLRPVPKVFDLIDGKFGAKPVEQKDKDFDSV
SLCMEDQLRVLGILGNSNESLSSILNSKMLKAIDLDSNTLYKKVKATTLSMESNDAINLL
KILIDLWLSRNKSVTHVLPWIRSILVYHGDHVKSQEPKLLDALNKLTRSRGVTMDLLFQL
SGRLQLVSAQIDKATSNNSLVIQHDEQDGGSEDESFDEVLYDEDDDSRTSSENDV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgggttcttcccacatcagagacatattcactgcgttcagtccaactctggacttgttt
gcgttaagttttggtgatggtagaataaagatatgggacacagtaaagggtcaggtgcag
acggaatttacagatattgcttcatccgaatctactggtgtcttcggaaaagatgaacga
gggcacctttcaatggattatacatgtatgaagtggttatctttggacagaaagaaaaaa
aggaagcttggaagttctttattggtcttgggaacaggcggtggcgatgtactggcgttg
gatgtgtctgctggtcagatgaagtggtgtattaacaattgtcatccagggggtgttaat
gccatatcctttcctgctaatggttcaagcatttacactgctggggtggatggaatggtt
tgtgaaataaactcaatgtcaggagatttgcttggaaagtttagggctatgtcaagatca
atatcttctctatatgtttccccagatgggaaaatggtagcgacagctgcaggtcaattg
aagattttcaatagctcagattgcaaaaaactgcagaagttttctggtcatcccgggcca
gtgagatgtttgattttctcagaagatggtagatatttgctttcctccgctatgggcgaa
cgatatgttgcaatttggagaattgatggtagtaaagagaaatcagcctacttgtttctc
acgatggaccatcccgcggttttcttggattgcaagtgcttcaatagtggagatgaagac
gatatagttctctctgttctggctatatcagaaatgggtatatgctatttttggcatgca
aataccatggatgaattacgcaattccaaacccaccaaaatttgcataacttgtgatgag
ggacagaaacacaagggggcacttgcttctgtttttgctgcgaaactacaaaccatttcc
aagcctgcatgtggtcatgtgtttcttgcttatggtttactaattaaaccattattcaac
aaagttgtggtgcattcagggactgacataaatttgaatatttcacatgatgggatcctt
cttcccgtcaatcaatctcagaaaccaaagaaagcatcagacttgcgcaatcgagttact
gctctggatcggtctaatgccgaaggtggtttgcgtcctgtgcctaaggtatttgacttg
attgatgggaaatttggagctaagcctgtggaacaaaaagataaagatttcgactctgtg
tccctttgtatggaagaccagctgagggttttgggaatacttggcaacagcaatgaatca
cttagctcaatattgaattccaaaatgttgaaggccattgatcttgattcaaacacactg
tataagaaggtgaaggcgacaaccttgtcaatggaatcgaatgatgcaatcaacctttta
aagatcttgatagatctttggctgtcaagaaataagagtgtgactcatgtccttccatgg
atacgctctatattggtatatcatggagatcatgttaaatctcaggaaccaaaacttctt
gatgccttgaacaagctcaccagatctagaggggtgaccatggacttgttatttcagtta
tctggtcggctgcagcttgtgtctgctcagattgataaggctacgagtaacaatagtctt
gtaatacaacatgacgagcaagatggtggaagtgaagatgagagttttgatgaagtgctt
tatgatgaagatgatgattctcgtacgagcagtgaaaatgatgtgtag
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