Henckelia pumila: 140863707
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Entry
140863707 CDS
T11037
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB4 isoform X1
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
hpum Henckelia pumila
Pathway
hpum03022
Basal transcription factors
hpum03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140863707
09124 Replication and repair
03420 Nucleotide excision repair
140863707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpum03021
]
140863707
03400 DNA repair and recombination proteins [BR:
hpum03400
]
140863707
Transcription machinery [BR:
hpum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
140863707
DNA repair and recombination proteins [BR:
hpum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
140863707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
140863707
NCBI-ProteinID:
XP_073123415
LinkDB
All DBs
Position
4:complement(160845574..160850762)
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AA seq
293 aa
AA seq
DB search
MATVPSKLYSDDVSLLMVLMDANPFFWNSVKSNYLFSEFITHVLAFLNSIFLLNQFNQVV
VIATGYNSCDYIFDSSALHGQNQRAESLLQKLEDFLDKDESLCRENSVKGPGVSLLSGSL
SMALCYIQRVFRSGPFHPQPRILCLHGSPDGPAQYVAIMNSIFSAQRLMVPIDSCVIGAQ
HSAFLQQASYITGGTYLKPQLLDGLFQYLATVYATDLHSRAFLQLPKPVGVDFRASCFCH
KNTIDMGFICSVCLSIFCEHQKKCSTCGSVFGQSQAQNSSAPEQQKRKTPMYS
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggctacagttccgtccaagctttactcagatgatgtcagcttactgatggtactcatg
gatgcaaaccccttcttttggaactctgtgaaatcgaattacctcttctccgagttcata
acacacgtattagcattcttgaattcgatattcctattaaatcagttcaaccaagtggta
gtgatagcaactggatacaattcttgtgactacatatttgattcctcagctttgcatggt
cagaatcagagggcggagagtttactgcagaagttggaggactttctcgacaaggatgag
tcactttgccgtgaaaactcggtcaaaggtcccggtgtctcacttctctctggatccctt
tccatggccctttgctatattcaaagggtgtttcggtcaggtccttttcatccacagcct
cggatcttatgcttacatggatctccagatgggcctgcgcaatatgttgcaatcatgaat
tcaattttctctgctcagcgcttaatggttcctatagattcatgtgtaataggagctcaa
cactcggcttttctgcagcaggcctcttatataactggtgggacatatctgaaaccacag
ctattggatggactgtttcagtatctagcgacagtttatgccaccgatctgcattctcgt
gcctttttacaacttcctaagcctgtgggagtggatttccgtgcctcgtgtttttgccac
aaaaacacaatcgacatgggcttcatatgctctgtttgtttgtccatattctgcgaacat
cagaaaaaatgctcaacctgcggatcagtttttggtcaatcccaagcccagaactcctca
gcaccggaacaacaaaagagaaaaaccccaatgtattcttaa
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