Henckelia pumila: 140864228
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Entry
140864228 CDS
T11037
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
hpum Henckelia pumila
Pathway
hpum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140864228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpum03019
]
140864228
Messenger RNA biogenesis [BR:
hpum03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
140864228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
140864228
NCBI-ProteinID:
XP_073124353
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Position
4:complement(3590999..3595204)
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AA seq
313 aa
AA seq
DB search
MANLTPSLNLKAIPFEAGSTSSAANKDRRMQSAEQLVLDLCHPDLRENALHELSKKRELF
QDLAPLLWNSFGTVAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRML
FLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTDVIGFLLSTEIIPLCLR
TMEMGSELSKTVATFIVQKILLDDIGLEYICTTAERFYAVGRVLGNMVTVQAEQPSPRLL
KHIIRCYLRLSENQRACEALRSCLPDLLRDATFNSCLREDPTTRRWLQQLVYNVQAARPP
MQAGNGFEHMMAN
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacctcactccgtcgctaaacttgaaggccatccccttcgaagccggcagcacc
tcttctgcggccaacaaggacaggagaatgcaatcggctgagcagttagttctcgatctt
tgccatcccgatcttcgggaaaacgcactccacgaactctccaagaagagggaactgttc
caagatttggctccgttgttgtggaattccttcggtactgttgctgctcttttgcaggag
attgtctctatttatcctgttttatcaccaccaaacttaactccggcacaatcaaacaga
gtttgcaatgcacttgctcttcttcagtgtgtggcatcacatccagacactagaatgctg
ttccttaatgcccatattcctctttatttgtacccttttctcaacacaaccagcaaatcg
aggccctttgagtacttgaggctgactagtttaggcgtcatcggtgctctagtgaaggtt
gatgacactgacgttatcggtttcctgctctctactgagatcattcccttgtgcctgcgc
acaatggagatggggagtgaattgtcaaaaacagtggcaaccttcatcgtgcagaagatt
ttacttgatgatattggcttagagtacatatgcacgacagctgagcggttctatgctgta
ggtagagtacttggaaacatggttactgtgcaagctgaacaaccttctcctcggctgtta
aaacacataatcagatgctatcttcggttgtccgaaaatcaaagagcttgtgaagcactg
agaagctgtctacctgatttgcttagagacgccacctttaacagctgccttcgtgaagat
ccaactactagaaggtggttacaacagttggtttacaacgttcaagccgctcggcctcct
atgcaagccggaaatggattcgagcatatgatggccaattaa
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