Henckelia pumila: 140864506
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Entry
140864506 CDS
T11037
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
hpum Henckelia pumila
Pathway
hpum04142
Lysosome biogenesis
hpum04144
Endocytosis
hpum05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140864506
04142 Lysosome biogenesis
140864506
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
140864506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hpum04131
]
140864506
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hpum04147
]
140864506
Membrane trafficking [BR:
hpum04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
140864506
Exosome [BR:
hpum04147
]
Exosomal proteins
Proteins found in most exosomes
140864506
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
IcmW
Motif
Other DBs
NCBI-GeneID:
140864506
NCBI-ProteinID:
XP_073124836
LinkDB
All DBs
Position
4:complement(25503986..25517615)
Genome browser
AA seq
1731 aa
AA seq
DB search
MAAANAPITMKEALTLTSIGINPQFITFTNVTMESDKYICVRETAPQNSVVIIDMSMPNQ
PLRRPITADSALMNPNTRILALKAQLPGTTQDHLQIFNIEAKAKMKSHQMPEQVVFWKWI
SPKMLGLVTQSSVYHWSIEGESEPVKMFERTANLANNQIINYKCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLFSVDQQRSQALEAHAASFASFRVAGNDKDSILISFATKSSNSGQISS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYSLLYVITKLGLLFVYDL
DSAAAVYRNRISPDPIFLTSEASSVGGFYAINRRGQVLLATVNEATIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQVKISPIYVPTTYILFLHL
NQTFYVCLQHYAELPDIKRVIVNTHAIEPQALVEFFGTLSPEWALECMKDLLLVNLRGNL
QIIVQVAKEYCEQLGVATCIKLFEQFKSYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTG
QIKEVERVTRESNFYDPEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYSNNMLRY
IEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVDECEKRNRLRLLT
QFLEHLVSEGSQDVHVHNALGKIIIDSNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVV
AYRRGQCDDELINVTNKNSLFKLQARYVVERMDADLWGKVLDPENEFRRLLIDQVVSTAL
PESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSR
VMDYINRLDNFDGPAVGEVAVEAQLYEEAFAIFKKFNLNVQAVNVLLDNIRDINRAVEFA
FRVEEDAVWSQVAKSQLREGLVSDAIESFIRADDVTQFLEVIRAAEDADVYHDLVKYLLM
VRQKTKEPKVDSELIYAYAKIDRLGDIEEFILMPNVANLPNVGDRLYDEALYEAAKIIFA
FISNWGKLAITLVKLKQFQGAVDAARKANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQ
VDDLEEVSEYYQNRGCFNELISLMESGLGLERAHMGIFTELGVLYARYRHEKLMEHIKLF
STRLNIPKLIRACDEQQHWQELTYLYVQYDEFDNAATTVMNHSPEAWEHLQFKDIIVKVA
NVELYYKAVHFYLQEHPDLINDVLNVLALRVDHTRVVDIMRKAGHLRLVKPYMVAVQSNN
VSAVNEALNDIYVEEEDYDRLRESIDLHDSFDQIGLAQRIEKHELLEMRRVAAYIYKKAG
RWKQSIALSKKDNLYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRP
DVALELAWMNNTIDFAFPYLLQFIREYTGKVDELIKDKIEAVKEVKAKAEEEKDVIMQQN
LYAQLLPLALPAPPMPGMGGQGMGGYPAPPPMGGMGMPPMPPFGMPPMGPY
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcaaatgctccgatcaccatgaaagaggccctaacgttgactagcataggg
atcaatcctcagttcattacgttcaccaacgtgactatggaatctgacaagtacatatgc
gttcgtgagacggcacctcagaacagtgtggtgattattgacatgagcatgccaaatcag
ccgttgagacggcctatcactgcggattctgctctgatgaacccgaataccagaattttg
gcactgaaagctcaacttcctgggaccactcaagatcacttgcaaattttcaacattgag
gccaaagcaaagatgaagtctcatcagatgccagagcaggtcgtattttggaagtggatt
tctcccaagatgttaggtttagtgacccaatcctcagtttaccactggtcgattgaaggt
gaatctgaacctgtaaagatgtttgaaagaactgcgaatttagcaaacaatcaaatcatc
aattataaatgtgacccttctgaaaagtggttggttttgattgggattgctcctggttca
cctgagcggccacaactcgtcaaaggaaatatgcagctcttttctgtagaccagcaacgc
agtcaagctcttgaagcacatgctgcatcttttgcctctttccgagttgctggaaatgat
aaagactcaattctcatttcttttgcaacaaagtcctctaattctggtcagatttcatcg
aagttgcatgttattgagcttggtgctcagccagggaagccatcttttaccaaaaagcag
gcagatttattcttccctccagattttgctgatgacttcccggtggctatgcagatatcc
cacaagtatagtcttctttatgttatcacaaagcttgggctgctctttgtgtatgatttg
gattctgctgctgccgtatatagaaataggatcagtccggatcccatttttctgacatca
gaggcttcatcagtcggaggtttctatgctattaacaggcgaggccaagttttacttgca
actgtaaatgaagcaactatagtgccttttgtcagcggccagttaaacaatctggagctc
gctgtcaaccttgcaaaaagaggaaaccttcctggtgctgagaatttggtggttcaacgt
tttcaagaattgtttgctcagacaaagtataaagaggctgccgagcttgctgcagaatct
cctcaaggcatactgaggacaccagatactgttgccaaatttcagagtgtacctgttcaa
gctgggcagacaccaccattgttgcagtactttgggacattgttaactaaaggaaagctt
aacgcatttgagtctttggagttatcacggcttgttgttaaccagaacaagaagaattta
ttggagaactggttggctgaagataaacttgaatgcagtgaggaacttggagacctggtg
aagactgttgacaatgaccttgcactgaaaatatatatcaaagcgagagctacaccgaaa
gtcgtggcagcttttgctgagcgtcgtgagtttgacaaaatcttgatatattcaaagcag
gttggatacacaccagactatctgtttcttttgcaaaccattctccggtcagatcctcag
ggagcagttaattttgctcttatgatgtctcaaatggaaggaggttgtcctgttgattac
aatactattactgatctcttccttcagaggaacatgatccgcgaagcaacagcatttctg
ttggatgtcctgaaaccaaatcttccagagcatgcattcctgcaaactaaggtcctggag
atcaatctcgtgacctttcccaatgtagcagatgctattttggctaatggcatgtttagt
cattacgacaggcctcggattgctcaactttgtgagaaagctggcctttatgttcgagca
ctacaggttaaaatctcacccatttatgtacccacaacttacatattatttttgcatctc
aatcaaacattttacgtgtgcctgcagcattacgctgagctgcctgatatcaaacgagtt
attgtcaacactcatgcaattgagccacaggcacttgtggagttctttggtacactttcc
ccagaatgggctctggagtgtatgaaggatcttttactagtcaatttaagaggaaacctt
cagataattgtccaggttgctaaagaatattgcgaacaattgggtgttgcgacttgtatt
aagctctttgagcagttcaagtcatatgaaggattatatttcttcctaggatcatatttg
agctccagtgaggatcctgatattcacttcaagtacattgaggctgctgccaagactgga
caaattaaagaggttgagcgtgtaaccagagaatcaaatttctatgaccctgaaaagact
aagaattttttaatggaagcaaaacttccagatgcacggccattaatcaatgtgtgtgac
cgctttggttttgttccagacctcacccattacttgtactcgaacaacatgcttcgctat
attgaaggttatgtgcagaaggtcaatcctggaaatgctccattagttgttgggcagctc
ctagacgatgagtgtcctgaagattttattaaaggcctgattctctctgttcgttctctg
cttccggttgagccactggtggatgagtgtgagaaaaggaatcgtcttcgcttgcttact
cagtttctggaacatcttgtgagcgaaggaagccaagatgtgcatgtccacaatgcgttg
ggtaaaataatcatagatagcaacaacaatccggaacattttctcaccaccaacccatat
tatgattcacgtgttgttggtaaatattgtgaaaaacgtgatcctacccttgccgttgtg
gcataccggagaggacagtgtgatgatgaacttattaatgtgacaaataagaattcgttg
ttcaagctgcaagcaagatatgtggttgaaagaatggatgctgatctctggggaaaagtt
ctcgatcctgaaaatgaattcagaaggctgcttattgatcaagtcgtatctactgctttg
ccagaaagcaagagcccagagcaagtttctgctgctgttaaagcttttatgactgctgat
ctcccccacgaactaattgaattacttgaaaagattgttcttcagaactctgccttcagt
ggaaactttaacctacaaaatttacttatcttgactgcaatcaaggcagatccttctaga
gttatggactatattaatagacttgataactttgacggccctgcagtcggagaagtggct
gtggaagctcagttgtatgaagaagcttttgctattttcaagaagtttaatttgaatgtt
caggcagttaatgttttgctagataatattcgggacattaatcgagctgtagagtttgct
ttccgtgttgaagaagatgctgtttggagccaagttgctaaatctcaactcagggaagga
ctggtgagcgatgcaatagagtcatttattcgcgcggacgatgttactcaattcctggag
gtcatccgagctgccgaggatgctgacgtttatcatgacctggtgaagtaccttctcatg
gtcaggcagaaaacaaaggagccaaaagtcgacagcgagctcatttatgcatatgctaag
attgatagattgggtgacatcgaagaatttattcttatgccaaatgttgctaatctgccc
aatgttggtgatcgcttgtatgatgaagctttatatgaggctgcaaagattatttttgct
tttatctctaactggggcaaattggcaatcacacttgtgaagttgaagcaatttcaaggt
gctgttgatgcagcaagaaaagccaacagcgcaaagacatggaaagaagtctgctttgcc
tgtgttgacgctgaggagttccgcttggctcagatatgtggtcttaacatcattgtacag
gtggatgatctggaagaggttagcgagtattatcaaaacagaggatgctttaatgagctt
atatctcttatggaaagtggtttagggctggaacgtgcacatatggggatttttactgag
ttgggtgtcttgtatgctagatatcgtcatgaaaagcttatggagcacatcaaattgttt
tctacacgtctaaatattcccaagctgatcagagcatgtgacgaacaacagcattggcaa
gaattaacttatctatatgttcagtatgatgagtttgataatgctgctacaactgtgatg
aatcattccccggaagcttgggagcacctgcaattcaaagatattattgtcaaagttgcc
aatgtggagctatattacaaagctgtgcatttctatttgcaagaacatcctgacctcatc
aatgatgtcctgaatgttcttgcccttcgcgttgatcacactcgtgttgtagacataatg
agaaaggcgggtcatctacgtcttgttaagccttatatggttgcagttcagagcaataat
gtgtctgcagtgaatgaagctctcaatgacatctatgtagaggaggaggattatgacaga
cttcgcgaatcaattgacttgcacgatagctttgatcaaattggtcttgctcaaaggatt
gagaaacatgagcttctggagatgaggcgtgttgcggcctacatttacaagaaagcaggc
aggtggaagcaatcgattgcattatcaaagaaagacaacctctacaaagatgcaatggaa
acagcttcacaatctggtgatcgtgaactcgctgaagagttacttgtttacttcattgaa
cagggcaagaaggaatgctttgcatcatgcctttttgtttgttacgacttgattcgtccg
gatgttgcacttgaacttgcctggatgaataacacaattgactttgccttcccatatcta
ttacagtttatccgtgaatatactggcaaagtggatgaactaataaaggacaagattgag
gctgtgaaggaagtaaaagctaaagcggaggaggagaaagatgtcatcatgcagcagaat
ttgtacgcccaattgttgcctcttgctttgccagcaccacctatgccgggtatgggaggt
caaggcatgggaggttaccccgcaccaccgccaatgggtggcatgggtatgcctccaatg
ccaccgtttggcatgccaccaatggggccctattga
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integrated database retrieval system
