Henckelia pumila: 140864717
Help
Entry
140864717 CDS
T11037
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
hpum Henckelia pumila
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpum03009
]
140864717
03036 Chromosome and associated proteins [BR:
hpum03036
]
140864717
Enzymes [BR:
hpum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140864717
Ribosome biogenesis [BR:
hpum03009
]
Eukaryotic type
Pre-60S particles
Helicases
140864717
Chromosome and associated proteins [BR:
hpum03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
140864717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
FlpD
CMS1
Motif
Other DBs
NCBI-GeneID:
140864717
NCBI-ProteinID:
XP_073125144
LinkDB
All DBs
Position
4:complement(22741683..22747613)
Genome browser
AA seq
616 aa
AA seq
DB search
MEIGEAMNDLRNKKKRMKLKVDEDEEEENPNAVSNFRISKPLRDNLKVKGIESLFPIQAM
TFDIVFDGADLVGRARTGQGKTLAFVLPILESLTNGPAKASRKTGYGRAPSVLVLLPTRE
LATQVFSDFEAYGGSLGLNSCCLYGGSPYQPQQIQLKKGVDIVVGTPGRIKDHIERGNID
LRALKFRVLDEADEMLRMGFVEDVELILGKVEDASKVQTLLFSATLPAWVKQIAAKFLKH
DKKTADLVGNEKMKASTSVRHIVLPCSSSARSQLIPDIIRCYSSGGRTIIFTETKDSAST
LAGLLPGARALHGDIQQATREVTLSGFRSGKFSTLVATNVAARGLDIDDVQLIIQCEPPR
DVEAYIHRSGRTGRAGKSGVAVMLYDPRKSNFSKIERESGVKFEHTSAPQPADIAKAAGL
EAAEKITEISDSVIPVFKAVAEDLLNSSDLSPAELLAKALANAAGYTEIKSRSLLTSMEN
FVTIFLQSGRPIYSPSYVYGILRRFLPEEKVESIKGLSLTVDGKGAVFDVAAKDLDTFIA
GQENAAGVNLEVVKALPNLQQREPARGGRFGGSARGGFPDRQNGRFSGGRGGKGGFADWR
GRGGGGRGRGNASHKW
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggagattggcgaggcgatgaatgatctaagaaacaagaaaaagaggatgaaattgaaa
gtggatgaggatgaggaggaggagaaccccaatgcggtgtctaatttccgtatatcgaag
ccgttgagggacaatttgaaggttaaagggattgaatcattgtttcctattcaagcaatg
acgttcgatattgtttttgatggtgcggatttggttggaagggcgcgcactggtcagggg
aaaacattggcattcgtgttacccatattagaatcgttgacaaatgggcccgcaaaagca
tcccgaaagactggatatggaagggcacctagcgttcttgtgcttttacccactagagaa
ctggccacacaggtattttctgactttgaagcctatggtgggtcgttggggttgaattca
tgttgcctgtatgggggttctccctaccagccacaacaaattcaattgaaaaaaggtgtt
gatattgttgttggtactcctggtcgtatcaaggatcacatagagagggggaatattgat
cttagggcactaaagttccgagtacttgacgaggctgatgaaatgttgaggatgggtttt
gttgaagacgttgaacttattctcggcaaggtagaagatgcaagtaaagttcaaactctc
ctatttagtgccactctaccagcctgggtgaagcaaattgcagctaaatttttaaaacat
gataaaaagaccgctgatcttgttggaaatgagaaaatgaaggctagcaccagtgtgaga
catatcgttcttccttgctcaagttctgctagatcccagcttattcctgatatcattcgc
tgctacagcagtggaggtcgcactattattttcactgagaccaaggactctgcttctaca
ctagctggattactgcctggagcacgagctttgcatggggacatacaacaggcaacacgg
gaagttacactttctggatttcggtctggaaaattttctacactcgtagctaccaatgtc
gccgcacgtggattagatatcgatgatgttcagttaataattcagtgtgagcctcctcgt
gatgtagaggcatacattcatcgatctggaagaacaggcagagcaggcaaaagtggtgtt
gctgtgatgctttatgatccaaggaagtcaaacttttcaaagatcgaaagagaatcaggt
gtgaaatttgaacacacatctgctccacaaccagccgatatagctaaagctgctggtttg
gaagctgcagaaaagatcaccgagatctctgatagtgttattccggtgttcaaggctgtt
gctgaagacctactaaactcatctgatttatcaccagcagaattgctcgcaaaagctctg
gccaatgccgctggctataccgagatcaagagcagatcacttctcacttctatggagaac
tttgtaacgattttcctccaaagtggaaggcccatatactcaccatcctatgtttatggg
attctacggagatttttacctgaagaaaaagttgagtcaatcaagggactttctttaaca
gttgatggaaaaggcgcagtgtttgatgtggctgccaaagatctggacacattcattgct
ggccaggaaaatgctgctggagtgaacttggaggtggttaaagcattacccaatttacaa
caaagagagccagctaggggtggaagattcggcggtagtgcacgtggtggattcccggac
aggcaaaatggtagattttccggtggaagaggagggaaaggagggtttgccgattggcga
ggccgcggtggaggaggtagaggtcgtggcaatgccagccacaaatggtga
DBGET
integrated database retrieval system
