KEGG   Henckelia pumila: 140865089
Entry
140865089         CDS       T11037                                 
Name
(RefSeq) DNA mismatch repair protein MSH2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
hpum  Henckelia pumila
Pathway
hpum03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hpum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    140865089
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hpum03400]
    140865089
DNA repair and recombination proteins [BR:hpum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     140865089
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_I MutS_II ATG17_like
Other DBs
NCBI-GeneID: 140865089
NCBI-ProteinID: XP_073125697
LinkDB
Position
4:complement(154537525..154547220)
AA seq 996 aa
MITLSSRGSRRACVKETPANSSTSSRQSLSPRTHTHTSFSAISTQFPETAVVARTMDKEL
EEQNKLPELKLDAKQTQGFLSFFKRLPRDPRAIRFFDRRDYYTTHGENAIFVAKTYYHTT
TALRQLGNGSDALSSVSVSKNMFETVVRDLLLERTDHTLELYEGTGANWRLVKSGTPGNL
GSFEDILFANNDMQDSPVIVAVSLNVKENIRNVGLSYIDLTRRTLGLAEFPDDSHFTNVE
SALVALGCKECLLSEEINKSSEYKPLMNAFSRCGAMITERKKTEFKARDLVQDLCRLAKG
STDSVRDLLFEFEISPGALACIVSYVNLLADESNYGNYTVQRYDLDSYMRLDSAAIRALN
VFESKTDANKNFSLFGLLNRTCTAGMGKRLLHLWLKQPSVDVNEINSRLDVVQAFVEDGA
IRQDLRQHLKRISDIERLICCLGKKRASLVHVVKLYQSSIRLPFIKSALEQYSGQFSSLI
RERYLDTLEKWTGDAHLNRFIGLVEVAIDLDQLENGEYLISADYNSQLSVLKSEQESLGQ
QIHELHINAANDLELALEKALKLEKGTQYGHVFRITKKEEPKVRKKLNTHFIILETRKDG
VKFTNTKLKKLSDQYQKVVEEYKNCQKDLVAKVVETVASFSEVFEGIAGPLSELDVLLGF
ADLAATCPTPYTRPSINPPDMGDIILEGSRHPCVEAQDWVNFIPNDCKLIRENSWFQIIT
GPNMGGKSTFIRQVGVNVMMAQVGSFVPCESASISIRDCIFARVGAGDCQMRGVSTFMQE
MLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIIEVIKAPTLFATHFHELT
SLAHDNAVDKLSSNKHIGVANYHVSAHIDPSNRKLTMLYKVEPGACDQSFGIHVAEFANF
PECVVALARAKASELEDFSPMEIFRHDADEIIPKRKREWDADDVGRGAERARQFLKDFSE
LPLDKMDLKQALEQVNNLREGLEKDSVSNSWLRQLF
NT seq 2991 nt   +upstreamnt  +downstreamnt
atgattactttgtcgagcaggggctcgagaagggcctgcgtgaaagagacccccgccaac
tcctccacttcttcccgccaatcgctaagcccgagaactcatacgcacacttctttctct
gcaatttctactcagtttccggagactgctgttgttgctagaacaatggacaaggaattg
gaagagcaaaataagcttcccgagcttaaacttgatgctaaacaaactcaagggtttctt
tcatttttcaaaagactacctagggaccctagagccattcggttttttgatcgtcgggat
tattatacaactcatggtgagaatgctattttcgtagcaaagacatactaccacactaca
actgctttgcgccagctaggaaatggatctgatgccctttctagtgttagtgtgagtaag
aacatgtttgaaacagtggttcgagaccttcttttggagaggaccgatcacactcttgaa
ttgtatgaaggcacaggagcaaattggcgactagtgaagagtgggacccctggaaatttg
gggagctttgaagacattctgtttgctaataatgacatgcaagactcccctgtaattgtg
gctgtttcactgaatgttaaggaaaacatacgtaatgttggcttgagctatattgatctg
actagaaggacactcggtctggctgaatttcctgatgatagtcacttcacaaatgtggag
tcagctcttgttgctctaggatgcaaagaatgcctcttgtctgaagagattaacaaatct
agtgaatataaaccattgatgaatgcattttccaggtgtggtgcaatgataacagaaaga
aagaaaactgagtttaaagcaagagatttggtacaggatctttgcaggcttgcgaaaggg
tctactgactcagtaagagatctgctctttgaatttgaaatctcaccaggtgccctagcg
tgtatcgtgtcttatgtaaatttacttgcagacgagagcaattatggtaactatacagtg
caaagatacgatcttgatagttacatgagattagactccgctgctataagggcactaaac
gtctttgagagcaaaacagatgctaacaaaaactttagcttatttggccttctgaataga
acctgtactgctggaatgggcaagcgattacttcatttgtggctgaaacaaccttcggta
gatgtaaatgagataaactctagactggatgtggttcaagcttttgttgaggatggagcc
attcgtcaagatttaaggcagcatttgaaaagaatttcagatatagagaggcttatctgc
tgtcttgggaagaaaagagcaagtttggtgcacgtggttaagctttaccagtcgagcatc
agattgccattcatcaaaagtgcattagagcagtacagtgggcagttttcttcactgatc
agagaaaggtatttggatactctagaaaaatggacaggagatgctcatttgaataggttc
attggtcttgtggaagttgcaattgaccttgatcaactcgagaatggagaatacttgatt
tcggctgactataattcacaattatctgttttgaaaagtgagcaagagtctttgggacag
cagatacatgaattgcacataaatgcagctaacgatcttgagctggcccttgaaaaagct
ctgaaactggaaaaaggcacacaatatggacatgtctttagaattacgaaaaaagaagaa
ccaaaagtaaggaagaagctaaatacccattttattattcttgaaactcgaaaagatggg
gtaaagtttaccaataccaaacttaaaaaactaagtgatcaataccaaaaggtggttgag
gagtataagaactgccagaaagatttggttgcaaaagtagttgaaactgttgctagcttt
tctgaggtgttcgaaggaattgctggacctctctctgaattagatgttttacttggtttt
gctgatttggctgctacttgtccgactccctacacacgacctagtatcaatccacctgat
atgggagacattattttagaaggaagtcggcatccttgtgttgaagcacaagactgggtg
aactttatcccaaatgattgcaagctaatcagggaaaatagctggttccagattatcaca
gggcctaatatgggtggaaagtcaactttcatacgacaggtgggcgtgaatgttatgatg
gcacaagttggttcctttgtcccatgtgaaagcgccagcatttctattcgtgattgtatt
tttgcaagagtaggtgctggtgactgccagatgcgtggagtttcaactttcatgcaagaa
atgctagaaactgcatcaatcttgaaaggagctacagacaagtctttaataataattgat
gagttaggtcgtggcacatcaacctatgatggatttggtttggcttgggctatttgtgag
cacataattgaagttataaaagcacccaccctgtttgcaactcactttcatgagttgacg
tcattagctcatgataatgctgttgataagctatcttcaaacaagcatataggagtagct
aattaccacgtgagtgcacacattgacccatcaaatcgcaagcttaccatgctttacaag
gttgaaccaggtgcctgtgatcaaagctttggaatacatgtagcagaatttgccaacttt
ccagaatgtgttgttgctcttgcccgcgcaaaggcttctgaattggaagatttttcgccc
atggaaatttttcgccatgatgcagatgagattataccaaaacggaagcgagaatgggat
gctgatgatgtaggtaggggcgctgaacgagctcgccagttcttgaaggacttctctgag
ctgccgctggacaaaatggacttgaagcaagcgttggaacaagttaacaatttgagagag
ggattggagaaggattccgttagcaatagctggctccgacagttattctag

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