Henckelia pumila: 140865101
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Entry
140865101 CDS
T11037
Name
(RefSeq) pre-mRNA-processing protein 40A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
hpum Henckelia pumila
Pathway
hpum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140865101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hpum03041
]
140865101
Spliceosome [BR:
hpum03041
]
Complex A
U1 snRNP components
U1 related factors
140865101
Complex B
140865101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
140865101
NCBI-ProteinID:
XP_073125710
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All DBs
Position
4:complement(144007756..144019566)
Genome browser
AA seq
1033 aa
AA seq
DB search
MASNPPSSGSQSLWPPPASGSMNSPGFASPYAMQFRPAAPAPQLQPFITASATQQFPPVG
QEQNLGVPPGQNHLLPFSQPIQQFLPRSGQLGLATPSSYAQINMPVTSGMPQPQATAPSH
GISFSSSYTFAPSSFGLSQNIINVPPHFQPSSQFSAPVGSSTGQPWLHSSQDTPVVAPLQ
QGSQQAVAIGAPITAINGSSSSQQVGSDWQEYEAADGRRYYYNKVTKQSSWEKPLELMTS
LERADSLTVWKEFTTPEGRKYYYNKETKQSKWTIPVELKLAREQAEMTAAQRAHPELNPE
QPSATVNLSSSTTPPTPGVAAPVPVVAAPIGSDANTSSPLISEPLGTPAIKTASTSEIGM
PMVENVNISPSEVPESSGVPAMLSNANSTAIASTENPSSHVVSSPIGGASIQDIELFQEA
KRGMAAAGKINVTPVEQKTEDAETFIYASKQEAKNAFKSLLESANVEADWNWDQAMRVII
NDKRYGALKTLGERKQAFNEYLMQRKKVEAEERRLRQRKAKEEFMKMLEESEELTSSTRW
SKSVTMFEDDKRFKAVEKDAEREDIFRNYLVDLHKKERAKAQEEYRQNRLEFRQFLEACS
FIKVDSQWRKVQDLVEEDEICTRLDKIDRLDIFQDYIRDLEKEEDEQKKRQKEQLRRAER
KNRDAFRKMMEEHVADGTFTAKTHWRDYCQKVKDSEPYEAVASNTSGSTPKDLFEDVAEE
LEKKYDEDKVRIKDVLKLEKITISSTWTFEVFESSIKDGIGSPSISDINLQLIFEDLIER
SRDKEEKESKKLKRLAKDFTDKLSTIKEINAFSSWEECKELVEGSSEYRSMREESLCREI
FDEYVSRLQEKMKEKERKREEEKAKKEKEKEREEKEKEKEKEKEKEKRKDKERREKERDK
EDRDRDADREKEKDKGKDHSRKDEVESESMDVFESHGHKDDKKREKDKERRHRKRHQSTA
DDAISDKDEKDETKKSRRHGSDRKKSRKHNYSPESDSESRHKRHKRDYHDGYRRNGGHEE
LEDGELGEDGEIQ
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtaaccccccctcatctggttctcagtcactttggccaccaccggcatctgga
tccatgaactctccgggttttgcttctccctatgctatgcaattccgtccagctgctccg
gcgccacaactacagccatttattactgcatcagccacccagcaatttccacctgtaggg
caggaacaaaatcttggggtccctcctggtcaaaatcatctgcttcctttttctcaacca
atccaacagtttctgccacggagcggtcagcttggacttgcgacaccatcttcatatgct
caaataaatatgcccgtcacatcaggcatgccacagccacaggctactgctccaagccat
ggaatctcattttcatcatcctacacttttgcaccatcttcttttggcttgtcacaaaac
atcattaacgtgccgccccacttccaaccttcatcccaattctctgcacctgttggttct
tctactggacaaccatggttgcactcaagccaggacacaccagttgttgcaccattgcag
caaggtagccagcaagccgtggctattggtgccccaatcacggctattaatgggtccagt
tcttctcagcaggttggttctgattggcaagaatacgaagctgctgatggaagaagatat
tactacaacaaggtcaccaagcaatccagctgggagaagcctctcgagttgatgacttct
ctggagagagctgattcattaactgtctggaaagaattcactactccggagggtcgaaag
tattattacaacaaggaaactaagcaatctaaatggaccattcctgttgagttgaagttg
gctcgcgaacaggctgaaatgactgctgcccaaagagctcatccagaactgaatcctgaa
caaccttctgctaccgtcaatttgtccagctccactacaccaccaactcctggagttgct
gcacctgttccagttgttgctgcacccattggctcagatgctaatacatcctctccctta
atttctgaaccccttggtactcctgcaataaaaactgcttccacaagtgagattgggatg
ccaatggttgaaaatgttaatatatccccttctgaagttcctgaaagttctggcgttcca
gctatgttgtcaaatgccaattcaacagcaattgcgagcacagagaatccatcatcccat
gttgtctctagtccaataggtggagcttctattcaggatattgagttatttcaggaggca
aagcgagggatggctgctgcagggaagataaatgtcacaccggtggaacagaaaacagag
gatgcggaaactttcatatatgctagcaagcaggaggcaaagaatgcatttaaatcactc
ttagagtctgcaaatgttgaggctgattggaattgggaccaggctatgcgagtgataatc
aacgacaaacgatatggtgctctgaaaacccttggtgaacgcaaacaagcatttaatgag
tacttgatgcaaaggaaaaaagtggaagctgaagagaggcgtctcaggcagagaaaagca
aaggaggaattcatgaagatgctggaagaatcagaagaactcacatcatccacacggtgg
agcaaatcagtgacaatgtttgaggatgataaacgattcaaggctgtcgagaaagatgct
gaacgtgaggatatctttagaaactacttggttgatcttcataaaaaggaaagagcaaag
gctcaagaggagtatcgtcaaaataggcttgaatttcggcagtttctagaagcatgcagc
tttataaaggtggatagccagtggcgcaaggttcaagatctcgtggaagaagatgaaatt
tgcacacgccttgataaaatagatcggctggatatttttcaggattatatccgtgacttg
gagaaggaggaggatgagcagaaaaaaagacagaaggaacaattaagacgagctgaacgt
aaaaaccgtgatgcatttcgcaagatgatggaagaacatgttgctgatggcacttttacg
gctaaaacacactggcgagattactgtcagaaggtcaaggattctgagccgtatgaagct
gttgcctcaaatacttcgggttccactcccaaagatttgtttgaggatgtcgctgaagaa
ttggagaaaaagtatgatgaagacaaagttcgcataaaggacgtgttgaagctggaaaag
atcactatttcatcaacatggacatttgaagtctttgagtcctctattaaggatggcata
ggttccccctcaatatctgacattaatttacagctcatttttgaagacctaattgagaga
tcaagggataaagaggagaaagaatctaagaaacttaaacgtctagccaaagatttcacc
gacaaactgagcaccattaaggaaataaatgcattttcaagttgggaggaatgcaaagaa
cttgtcgagggcagctcagagtacaggtcaatgagggaagaaagtttatgccgggagata
tttgatgaatatgtttctcgcttgcaagagaaaatgaaggagaaggaacgcaagcgagaa
gaggaaaaggccaaaaaggagaaagagaaagagcgggaggagaaggagaaggagaaggag
aaggagaaggagaaggagaagagaaaggataaagagagaagagaaaaagagagagacaaa
gaagaccgagacagagatgctgatcgtgagaaagaaaaggacaaggggaaagatcattcc
agaaaagatgaagttgagagtgagagtatggatgtttttgaaagtcatggacacaaagat
gacaaaaaaagggaaaaggacaaagagcgtagacataggaagcggcatcagagcacagct
gatgatgcaatttctgataaggatgagaaagatgagacaaagaaatctcgccggcatggt
agtgaccgtaaaaagtcaagaaagcataactattcccctgaatcagatagtgaaagtaga
cacaagagacacaaaagagattaccatgatggatatcgaagaaatggggggcacgaggag
cttgaagatggtgaacttggtgaggatggggagatacaatag
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