KEGG   Henckelia pumila: 140865800
Entry
140865800         CDS       T11037                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
hpum  Henckelia pumila
Pathway
hpum03030  DNA replication
hpum03410  Base excision repair
hpum03420  Nucleotide excision repair
hpum03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hpum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    140865800
   03410 Base excision repair
    140865800
   03420 Nucleotide excision repair
    140865800
   03430 Mismatch repair
    140865800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpum03032]
    140865800
   03036 Chromosome and associated proteins [BR:hpum03036]
    140865800
   03400 DNA repair and recombination proteins [BR:hpum03400]
    140865800
DNA replication proteins [BR:hpum03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    140865800
  DNA Replication Termination Factors
   ELG1-RFC complex
    140865800
Chromosome and associated proteins [BR:hpum03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    140865800
DNA repair and recombination proteins [BR:hpum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     140865800
  Check point factors
   HRAD17(Rad24)-RFC complex
    140865800
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_lid_RFC1 RCF1-5-like_lid AAA_16 AAA_22 AAA_assoc_2 AAA_11 DUF815 AAA_14 AAA_5 DNAX_ATPase_lid ATPase_2 RuvB_N AAA_30 ResIII AAA_7 AAA_24 nSTAND_NTPase5 nSTAND3 AAA_3 AAA_19 bpMoxR SLFN-g3_helicase AAA_28 AAA_2 AAA_18 Mg_chelatase nSTAND6 DO-GTPase1 DUF3086 RNA_helicase ABC_tran AAA_25
Other DBs
NCBI-GeneID: 140865800
NCBI-ProteinID: XP_073126675
LinkDB
Position
4:137895218..137898366
AA seq 360 aa
MADAITVMDIDDEDNNHTLKGNKGKNVVVSPPESKPTPWVEKYRPQSLDEVAAHRDIVET
IDRLASGNKLPHLLLYGPPGTGKTSTILALARKLYGNQMQNMVLELNASDDRGIDVVRQQ
IQDFASTQSISFGAKSAVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNVNKV
IPAVQSRCTRFRFAPLDAVNISERLKHVIKAEMLDVPENGLKALVRLSNGDMRKALNILQ
STHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFGTSYKKISEIKTRKGLALVDIV
REVTMFVFKIKMPADVRILLIKEMADIEYRLSLACSDKLQLGSLIAAFTRARVSLVAAAK
NT seq 1083 nt   +upstreamnt  +downstreamnt
atggcggacgcgattacagtcatggacatcgacgacgaagacaacaaccacactctgaaa
ggcaacaagggcaagaacgtcgtcgtatctccaccagaatccaagcccaccccctgggtc
gagaagtaccgtcctcagtctctggacgaggtcgcagcgcatcgtgacatcgttgagacc
atcgacagattagctagtgggaacaaattaccccatttgctgctttatggaccaccagga
acggggaaaacatccactatattggcattggctaggaagctgtatgggaatcagatgcaa
aatatggttcttgagctcaacgcatcagatgatcgtggtattgatgtggtccgacagcag
attcaggactttgcaagcactcagagtatctcttttggggcaaaatctgcagtaaagtta
gttctattggatgaggcggatgccatgaccaaggatgcacaatttgctctccgtcgtgtc
attgagaaatacacaaaaagcactagatttgctttgatttgtaacaatgtcaacaaggtt
attccagccgtacaatcaaggtgtacccggtttcgttttgctcctctcgatgctgtgaac
atcagtgagaggcttaaacatgttattaaagctgaaatgctagacgtacctgaaaatggt
ttgaaggctcttgtaaggcttagtaatggtgacatgagaaaagccttgaatattttacag
tcaacacacatggcgtctcagcagattactgaagaagctgtatacttgtgcactggaaat
cctttgcctaaagacatcgagcagatttcctattggcttctgaatgagacgtttggcacc
agttacaaaaaaatttctgaaatcaagacaagaaaaggattggctttggtagatattgtc
agagaagtaaccatgtttgttttcaaaatcaagatgccggctgatgttcgtattcttctt
ataaaggaaatggccgatatcgaatataggctgagtttagcatgcagtgataagctgcag
cttggatcactaattgctgcttttacccgagccagggtttcgcttgttgctgctgcaaaa
tag

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