Henckelia pumila: 140866404
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Entry
140866404 CDS
T11037
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hpum Henckelia pumila
Pathway
hpum00040
Pentose and glucuronate interconversions
hpum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140866404
Enzymes [BR:
hpum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140866404
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
140866404
NCBI-ProteinID:
XP_073127488
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Position
4:27366094..27368064
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AA seq
411 aa
AA seq
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MSNMVITISSFFFFFFFLHLISHPAVSTFSHVQDPDLVVQDVHQSINNASRRNLGYISCG
SGNPIDDCWRCDPNWENNRQHLADCAIGFGKNAGGGRGGRIYVVTDPGDDDPVNPRPGTL
RHAVIQSEPLWIIFKRDMVIRLNQELVMNSRKTIDGRGASVHISNGPCITIHYANNIIIH
GIHIHDCVKAGNGIIRDSPQHAGHWDVSDGDGISVFAGKNIWIDHCSLSNCNDGLIDVIH
GSTAVTISNNYFTHHDKVMLLGHSDGFGDDKNMQVTIAFNHFGEGLVQRMPRCRLGYFHV
VNNDYTHWEMYAIGGSADPTIYSHGNRFLAPNDRFRKEVTKHEDAPESQWMHWNWRSEGD
LMLNGAYFRQSGGGAWAAHSRASSLSARPVSLVGSVTRTAGALNCRAGSRC
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatatggtgatcaccatttcctcattcttcttcttcttcttctttctacacttg
atatctcatccagccgtctccacattctctcatgttcaagaccctgatcttgtggtacaa
gatgtgcatcagagcattaataatgcgtcaagaagaaacttaggctacatctcctgcggt
tccggcaaccccatcgacgactgctggcggtgcgaccccaactgggagaacaaccgccag
catttagccgactgtgccatcggcttcggcaagaatgcaggcggcggcagaggcggccgc
atctacgtcgtcacggaccccggtgacgacgatccggtgaacccacggcccggcacgctc
cgccacgcagtgatccaaagcgagccactgtggataatcttcaaacgggacatggtcata
cgcctgaatcaagaactggtgatgaactcccgcaaaaccatcgacggccgcggcgccagc
gtccacatatccaacggcccatgcatcaccattcactacgcgaacaacataataatccac
gggatccacatacacgactgcgtgaaagctgggaatgggatcatcagagactccccgcag
catgcggggcactgggatgtctcggatggggatggcatctccgtcttcgcgggtaaaaac
atctggatcgaccattgctcgttgtcgaattgcaacgacgggcttatagacgtgatccat
gggtcgacggcggtgacgatatcgaataattacttcactcatcatgataaggtgatgttg
ttgggacacagcgatgggttcggggatgataagaacatgcaggtgaccattgctttcaat
cattttggagaagggctggtacaaaggatgcctaggtgtaggcttgggtatttccatgtg
gtgaacaatgactatactcattgggaaatgtatgcgattggtggaagtgctgatcctacc
atttatagccacgggaacagattccttgcacccaatgatagatttagaaaagaggtgacg
aagcacgaggatgcgccggaaagtcaatggatgcactggaactggagatcggaaggcgat
ctgatgttgaacggcgcctatttccggcaatcgggtggtggagcttgggctgcgcattcg
agggcgtcgagtttaagtgctagaccagtttctcttgtgggttcagtcaccagaactgcc
ggggcacttaattgcagggcgggatctcgttgctag
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