Henckelia pumila: 140871456
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Entry
140871456 CDS
T11037
Name
(RefSeq) DNA mismatch repair protein PMS1 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
hpum Henckelia pumila
Pathway
hpum03430
Mismatch repair
hpum03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
140871456
03460 Fanconi anemia pathway
140871456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpum03400
]
140871456
DNA repair and recombination proteins [BR:
hpum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
140871456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
140871456
NCBI-ProteinID:
XP_073130112
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Position
1:153906390..153911982
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AA seq
912 aa
AA seq
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MPMEGGGSEASEPPSIRPLNKGVVHRICAGQVILDLSSAVKELVENSLDAGATSIEVALK
EYGLESFQVIDNGSGISPKNFRVLALKHHTSKLNGFQDLESLTTFGFRGEALSSLCALGD
LTIETRTSSEVVATHLTYDRSGLLTAERKTARQAGTTVTVKKLFSYLPVRSKEFQRNIRK
EYGKLIGLLNAYALVAKGVRLICTNTTGKNARSVVLKTQGGGSLKDNIITVFGMSTFSSL
EPVRVSITDDCMVEGFVSKSGYGSGRHIGDRQFFFANGRPVDVPKVGKLVNEVYRGANSR
QYPVVILDFSIPTRAYDVNVTPDKRKIYFSNESTILQSLRETLEKIYSSNQVTYTVNTVE
ELNEENLASKVDSLSESSEMPIKQLFQDDNVVREENDDKQCTNGSAAFTTVKGNRIDSSA
EELGTGVHAVKKQFMLRVHGDKKSQHINAVQSRLILKGGTDNSLQQSKIIQTSLSNFVTV
NKRKLENMDTALSEVPLLRSGPLDRLRDNRSVNHSSSLRSPVNSKKYDDYKNSTCSEAQP
AKTPRVVSFFDDAEPNVSLCSSNKEQSGTREAMDLPEQIIEERASSDAGVPSALRSTNSQ
PAHVDLPPHSLGKDSPTVSSGINVGFTLQFSVKDLMSRRKQRLSRLQSISHSSGRMNLKG
GFAAATLEHSQFANEEGKAKALAAATRELDRLFKKGDFNHMKVIGQFNLGFIIGKLDQDL
FIVDQHAADEKYNYERLSLTTILNQQPLFRPLLMELSPEEEIVISMHMDTFRKNGFLLEE
DMHAPPGNRFKLKAVPFSKNITFGVADVKELVSILSDSHGECSMIGSYREDSADSVCPPK
VRAMLASRACRSSVMIGDSLGKNEMQKILKHLADLKSPWNCPHGRPTMRHLIDLRTVNSQ
IGEVPAFWSLSS
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgccgatggaaggtgggggttctgaagcatccgagcctccatccatcaggccgctcaac
aaaggcgttgttcaccgaatctgcgcgggccaggtgattcttgatctctcttctgccgtg
aaggagctcgtcgaaaacagcctcgatgcgggtgctacgagtatcgaggtcgctctcaaa
gagtacggcctggagtccttccaagtcattgacaatggctccggcatttctcccaagaat
ttcagggtcttagctttgaagcatcatacgtcaaagctaaatggttttcaagacctcgag
tctctgaccacgtttggttttcgaggggaggctttgagttcgctttgcgctttgggggac
ttgactatagagacacgtactagtagtgaggtcgttgcgacgcacttgacttacgaccga
tcgggtcttctgactgctgagaggaagactgctcgtcaagccggaactactgtcactgtc
aagaaattgttttcctatttgccagtcaggagcaaagaattccaacgaaatattcgtaaa
gaatatggaaagttgattggtttattgaatgcctatgcactagttgccaaaggagttaga
ttaatttgcaccaacacaactggtaaaaatgctaggtctgtagtgctgaaaacacagggc
ggtggatctcttaaagacaatatcatcactgtgtttggtatgagcaccttttcttctttg
gaacccgtgagagtcagcattacagatgattgtatggttgaaggctttgtttcaaagtct
ggatatggaagcggacgtcacataggagatcggcaattcttttttgctaatggtcgccca
gttgacgtgcccaaagttggcaagcttgtgaatgaggtgtatagaggtgcaaattcccga
caatatcctgttgtgatcttggatttttcaattccaactcgggcatatgatgtgaatgtg
acaccagataaaaggaaaatatatttctccaatgaaagcacaatcttgcagtccttaagg
gagactctggagaagatttattcatcaaatcaagttacttatactgttaacacagtagaa
gaacttaatgaggagaatcttgcctccaaggttgattctctgagtgagagctctgagatg
cccataaagcaattgtttcaagacgataatgtggttcgagaggaaaatgatgataaacaa
tgcacaaatggcagcgcggctttcacaacagttaaagggaaccgcatagattcttctgct
gaggagctcggtactggtgttcatgcagtgaagaaacagtttatgctcagagttcatggg
gataagaaaagccaacatattaatgctgtccagtcaaggctgatccttaaaggtggtact
gataattcacttcagcaatcgaaaattatccagacatcactcagcaattttgttacagta
aataagagaaaactagaaaacatggatactgcgttgtctgaagttccgcttcttagaagt
ggacctcttgatagattaagggacaatcgctctgtgaatcattcttcatcactgagatct
ccagtcaattccaaaaagtatgatgattataaaaatagtacgtgcagtgaagctcaaccg
gcaaaaactccaagagtcgttagtttctttgatgatgcagagccgaacgtttctttatgt
tcatcaaacaaagagcaaagcggaacaagagaggcaatggacttaccggagcaaataatt
gaagagagagcatcatcggatgccggtgttcctagtgctttgagaagcactaattcacaa
cctgcacatgttgatcttccaccacattctttgggtaaagactccccaacggtttcttct
ggtataaacgttggttttaccttgcaatttagtgttaaagatttgatgtcaaggaggaaa
caaaggctgtcgagactacagtccataagccattcatctggaagaatgaatttgaaagga
ggttttgctgcagcaacattggagcattcgcaatttgcaaatgaggaggggaaggctaag
gctcttgctgctgctaccagggagttggatcggctatttaagaagggggactttaatcat
atgaaggtcattggacaatttaaccttggattcattattggcaagttggatcaggacctc
tttattgtagaccagcatgctgcagatgagaaatacaattatgagcgtttgtcactaaca
accatattgaaccagcaacctttgttccggccattgctcatggagttatctccagaagaa
gagatagtcatctccatgcacatggatactttcaggaagaatggctttttattggaggag
gatatgcacgctcctccaggaaatcgctttaaactaaaagcagttccattcagtaaaaac
ataacttttggggttgcagatgtcaaggagcttgtatctattctatccgatagtcatgga
gaatgctccatgattggcagttatagagaagactctgccgattcagtttgtccgcctaaa
gtacgtgcaatgctagcgtcacgtgcatgcaggtcatctgttatgattggagattctctt
ggaaagaacgagatgcagaagatattaaaacatttggcagacctcaagtctccttggaat
tgtccgcatggaagaccaacgatgcgacacttgatcgacctaagaactgtaaatagtcaa
attggtgaagttccggccttctggtctctttcttcttag
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