Henckelia pumila: 140872245
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Entry
140872245 CDS
T11037
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hpum Henckelia pumila
Pathway
hpum00040
Pentose and glucuronate interconversions
hpum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140872245
Enzymes [BR:
hpum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140872245
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
140872245
NCBI-ProteinID:
XP_073131157
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MKIPLFFIILLFPLLLINPAFILSSPVQDPELVVQEVNEKINISRRNLGFLSCGTGNPID
DCWRCDPDWEKNRQRLADCAIGFGKHSVGGRDGQIYVVTDSGDDAVNPKPGTLRYGVIRN
EPLWIIFERDMVIKLKQELMLNSFKTIDGRGASVHISGGPCITIQFVTNIIIHGLNIHDC
KQGGNAYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITL
SNNYLTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
WEMYAIGGSADPTINSQGNRFLAPDREENKEVTKHEDAPESRWKHWNWRSEGDLMLNGAF
FIQSGAGASSNYAKASSLSARPSSLVSSMTGGAGTLSCKKGKRC
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcccacttttctttattatattattatttcctttgttattgatcaatccagct
ttcatattatcttcaccagttcaagatcctgaactagtagtccaagaagtcaacgagaaa
atcaacatatcaagaaggaaccttggatttctctcgtgcggcacgggcaacccgatagac
gactgctggcggtgcgatcccgactgggagaagaaccgccagcgtctcgcggactgcgcg
atcgggttcgggaaacactccgtcggtggcagagacggccagatttacgtggtcactgac
tcgggggacgatgcggtgaacccgaaaccgggaaccttacgctacggcgtcatccgaaac
gagccgttgtggatcattttcgaacgtgacatggtgatcaaactcaagcaagaactcatg
ttgaactctttcaagaccatcgacggaaggggcgcgagcgtgcacatatccggaggaccc
tgcatcaccatacagtttgtgacgaacatcatcatacatggattgaacatacacgattgc
aagcaaggggggaatgcgtacgtgagggattcgccggagcattatgggtacaggacagtg
tctgatggagacggcgtgtcgatattcggagggagccatgtttgggtcgaccattgctcg
ttgtctaattgccgcgacggcttgatcgacgccatccacggctccacggctatcacgttg
tcgaataattacttgactcatcatgataaggtcatgcttttgggtcatagcgatagttat
actcaagataagaacatgcaagtgaccattgccttcaaccatttcggagaagggctcgtg
cagaggatgccgagatgcaggcatgggtattttcatgtggtgaataatgactacacacat
tgggaaatgtatgcgatcggtggcagtgcagatcctacaataaacagccaaggcaacaga
tttcttgcaccagacagggaggaaaataaagaggtgaccaagcacgaggatgcacccgaa
agcagatggaagcactggaattggagatcagaaggagaccttatgctaaatggtgcattc
ttcattcaatctggtgccggcgcctcgtctaattacgccaaggcgtctagcttgagcgcg
agaccatcgtctctggtgagctccatgaccggcggagccggcacactcagctgcaagaaa
ggcaaacggtgctag
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