Henckelia pumila: 140872371
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Entry
140872371 CDS
T11037
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
hpum Henckelia pumila
Pathway
hpum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140872371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hpum03041
]
140872371
Spliceosome [BR:
hpum03041
]
Common components
Common spliceosomal components
SR proteins
140872371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_3
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
140872371
NCBI-ProteinID:
XP_073131292
LinkDB
All DBs
Position
Unknown
AA seq
293 aa
AA seq
DB search
MSGRFSRLVYVGNLPADIRESEVEDLFYKFGRILDIELKIPPRPPCYCFVEFENARDAED
AIRGRDGYNFDGCRLRVELAHGGRGPSSSNERRGGHGRTSDGGGHGRTSDGGGHGRTSDG
GRHGISRHSEYRVVVRGLPSSASWQDLKDHMRKAGDVSFAEVYRDSEGAYGLVDYTNYED
MKYAIRKLDDTEFKNPWTRTYIRVKEHKGSPLRSRSRSRSRGRSPKRKRSKSSDRSASKS
PSASPAKPSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSASPKQDGIDS
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgtttctctcgcttagtttacgttggaaatcttccggccgatataagagaa
tctgaagttgaagacctattttacaagtttggtcgcatattggatattgaactgaagatt
cctccacgccctccatgttattgctttgtggagtttgagaatgcccgggatgccgaagat
gctattaggggtagagatggctataactttgatggttgtcgactgagggttgagcttgca
catggtggtagaggaccctcatcatctaatgagcgccgtggtggtcatggccggacgtcg
gatggcggtggtcatggccggacgtcggatggtggtggtcatggccggacgtcggatggt
gggcgccatggcatttctcgccattcagaatatcgtgttgttgttcgtgggcttccttct
tctgcttcttggcaagatttgaaggatcatatgcgaaaagctggggatgtttcttttgca
gaagtttatcgtgacagtgaaggagcctatggcctcgttgattataccaattacgaggac
atgaaatatgctataaggaaacttgatgatacggagttcaaaaatccttggaccagaact
tatatccgggttaaggaacacaagggcagtccattaagaagccgaagtaggagtcgcagt
agaggccgaagtccgaagaggaaaagaagcaaatcgtcggaccgatctgcttccaaatca
ccatctgcatctcctgctaaaccttctaggtccagatccaggtcaaggtcaaggtcaagg
tcaaggtcaaggtcaaggtcaaggtcaaggtcaaggtccaggtccaggtccaggtctagg
tccaggtctgcttccccaaaacaggatggtatagattcctag
DBGET
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