Henckelia pumila: 140873024
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Entry
140873024 CDS
T11037
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
hpum Henckelia pumila
Pathway
hpum03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140873024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hpum03036
]
140873024
Chromosome and associated proteins [BR:
hpum03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
140873024
INO80 complex (yeast)
140873024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
140873024
NCBI-ProteinID:
XP_073132088
LinkDB
All DBs
Position
Unknown
AA seq
1515 aa
AA seq
DB search
MDSKTKYTYANLFNLEPLMNFQLPKQDEDSDCFESSSQDESQGNQGEAIGGHSNGIMSDR
RSRKKKRLSVYGSEEEEAGNYSPYISEERYRTMLGDHIQKYRRRVNNSSQSPASAKTGTP
VMKSGIGLKEQKTTGDNRVGPHKLEPASDFLNIGSQKLGNYLESDIGLQYGAARTNLEPS
FLDIGDGITYRIPLPYEKLSSSLNLPSMSDIQVEEFYLKGTLDLGSLAAMMASDNRFRQR
SRAGMGDCKPQYESLQAKLKAQLGHNSAENFCLTISEAALQSNGIPEGAAGGIRRSILSD
GGVLQVFYVKVLERGDTYEIIERSLPRRPKMKKDPSVIEREEIEKTVKYWVSMVRKDIPK
HHRNFTSFHRKQLTDAKRFSESCQREVKMKVSRSLKLMRGAALRTRKLARDMLLFWKRVD
KEMVEVRKREEREAAEALKREQELREAKRQQQRLNFLLSQTELYSHFMQNKTSQTSEAFT
AGDENSNDQEMLLGSSGALPGDEDDLEDAKLRNEALKAAHDAVSKQKQMTNAFDTECLKL
RQAIEIDASMQDASVAESSNIDLLNPSTMPVASTVQTPELFKGSLKEYQLKGLQWLVNCY
EQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDL
KTLPYWGGLQDRTVLRKNINPKRLYRRNAGFHILITSYQLLVSDEKYFRRVKWQYMVLDE
AQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWF
SKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELSGKTEITVHCKLSSRQQA
FYQAIKNKISLAELFDGNRGHLNEKKLMNLMNIVIQLRKVCNHPELFERNEGSIYFHFGE
IPNFLLPPPFGELEDICYSGGRNPIVYEMPKLVYQEVVRDSKGLSRVLVDKLFNIFSPEN
ICRSTLQPDYSSDDTSLQSGTFGFSHLIDLSPAEVSFLAMGSFMERLLFSVMRSDRECLN
GLLDMLMEDEDYSDYTHIGKEKVRAVTRMLLVPSKSETNSLRRKFSTGAGDTPFEALITS
HEDRLLYDIKLLHSVYSFIPRTRAPPINAHCSDRNFAYMMAEEWHHPWLKRLLTGFARTS
DFNGPRKPGSSHQLIQEIDAELPVSQPALQLTYKIFGSCPPMQPFDPAKMLTDSGKLQTL
DVLLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVNDFQHR
NDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVSVYRLIC
KETVEEKILQRASQKSTVQQLVMTGGHVQGDLLAPEDVVSLLIDDAQLEQKLKEVSQQAK
DRQKKKGGTKGIRVDAEGGGASIEDFTNPGYGSESELPEPDKPKPTNKKRKAATGKQVEQ
KSRPQKSSKIVTSSSPNSMIMDYEHDVLMQNSDSLQQERPKRLKRPTKSLNETIEPAFTA
IPPVFQDQNQIAPVP
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atggactcaaagaccaagtatacatatgcgaatctctttaatcttgagcctttgatgaac
tttcaactgccaaagcaagacgaggattctgattgttttgaaagcagtagtcaggatgag
agccaaggtaaccaaggcgaagcaataggggggcattctaatggtataatgtcagatagg
agatcgaggaagaaaaagaggctgagtgtgtatggtagtgaagaggaagaggctggtaat
tatagtccctatatctcagaggaacggtatcgaacaatgctaggagatcatattcaaaag
tacagaaggagagtgaacaactcttctcaaagtccagcgtctgctaaaactgggacacca
gtgatgaaaagtggtattgggctaaaagagcagaaaacaactggtgataacagagtaggg
ccacacaagcttgaaccagcttcggattttctcaatatcggttcccaaaagttgggaaat
tatttagaatctgatattgggctgcaatatggtgctgccagaacaaatcttgaaccttct
ttcttggatatcggggatggaatcacttacagaatccctctaccatatgaaaagctttcg
tcatcattgaacttgccaagcatgtcagacatccaagttgaggagttttacctgaagggg
actcttgatttgggatcattggctgcaatgatggcttcggataacaggtttcggcaaaga
agtagggcagggatgggcgactgcaagccccagtatgaatctcttcaggcaaaattgaaa
gcccagttaggtcataactcagctgaaaatttttgtctaacaataagtgaagcagcattg
cagtcaaatggtatcccagagggggctgctggaggaatccgaaggtcaattttgtctgat
ggtggtgtgttgcaggttttttatgtgaaggttttggaaagaggagatacatacgagatc
attgaacgtagtttacccagaaggcctaagatgaagaaagacccttctgttatagagagg
gaggagattgagaagactgtaaaatattgggttagcatggtgaggaaagacattcccaaa
catcataggaatttcactagcttccaccgaaagcaactgacggatgcaaaacgattctca
gaatcctgtcagagagaggttaaaatgaaggtcagcagatccttgaaattgatgaggggt
gccgcactcagaactcgaaaactggcaagagacatgctattgttctggaagagagttgac
aaggagatggtggaagtgaggaaacgagaggaaagagaagctgcagaagcattgaagcga
gaacaggaacttcgagaagcaaagaggcaacaacagaggctcaattttctactgtcacaa
actgaactttacagccatttcatgcagaataagacttctcaaacctctgaagcatttaca
gcaggtgatgaaaattctaatgatcaagaaatgctgttgggttcttctggagctctgcct
ggggatgaagatgatcttgaagatgctaaactgagaaatgaagctctgaaagcagctcat
gatgcagtttcaaagcagaaacagatgacaaatgcatttgataccgaatgcttgaagcta
cggcaggccatagaaatagacgcctctatgcaagatgcgtcagttgctgaatcgagcaac
attgatttattgaacccatcaaccatgcctgtggcatcgacagtgcagacacctgagtta
ttcaagggttctcttaaagagtatcagctgaaaggccttcagtggcttgtaaattgctat
gagcagggcttaaatggtattcttgctgatgaaatgggcctggggaagacaattcaagcc
atggcattcttggctcatttagctgaggaaaaaaatatatgggggccttttctggttgtt
gctcctgcttcagttctgaataactgggctgatgaaatcagccgcttctgccctgatctg
aagactcttccatattggggtggccttcaagaccgtacagtacttaggaagaacattaac
ccaaaacgtctttaccgaaggaatgctggatttcacattctaattaccagttaccaactg
ctagtttctgatgagaaatactttcggcgtgtcaagtggcaatatatggtgttggatgaa
gcccaggcaataaaaagttcaaacagcataagatggaagacattgctgagtttcaattgt
cgtaatcgactgcttctaactggcactccaatacaaaacaatatggctgaactgtgggct
ctgctacattttattatgccaaccctatttgatagccatgaacaattcaatgagtggttc
tcaaaaggaattgagagtcatgcagagcatggaggtacattaaatgagcaccagctcaat
cgtttgcatgcaattctgaagcctttcatgctgcggagggttaagaaagatgtgatctct
gagttgtctgggaaaacggaaatcacagtgcactgtaaattaagttctcgtcagcaagct
ttttatcaggctataaagaataagatatccctggctgagttgtttgatggaaatcgtgga
catctcaatgagaaaaagcttatgaatttgatgaatattgttatccagctgaggaaggta
tgcaatcatccggagttgtttgagagaaacgagggaagcatatatttccattttggagag
ataccaaattttcttcttcctcctccctttggagaattggaagacatttgttattccggt
ggtagaaatcccattgtatatgagatgccgaagctcgtgtaccaagaagttgtccgtgat
tccaaagggttgagcagagtgctagttgataaactttttaacatattttctccagaaaat
atatgtcgatcaacactgcagccggattacagttcggacgatacctctttacaaagtgga
acttttggattttcccatctcattgatttgtcgccagcggaagtttcattcttggcaatg
gggtcatttatggagagattactgttttctgtcatgagatcggatcgtgaatgtttgaat
ggattattggacatgttgatggaagatgaagattatagtgactatactcacattggcaag
gaaaaggtgagagctgtcacacggatgttgctggttccatctaaatcagagacgaattct
ctaagaaggaaattttcaaccggtgctggggatactcctttcgaggctctaataacatct
catgaggacaggcttctatatgatattaaacttttgcattcagtatactctttcattccc
aggactagagcacctccaataaatgcccactgttccgatcgaaactttgcatatatgatg
gctgaagagtggcatcatccgtggcttaaaagattgttgactgggtttgctcgaacatcc
gactttaatggtccaagaaagccaggaagttctcaccaattaatacaagagattgatgct
gaattacctgtttcacaacctgctcttcagcttacttacaagatatttgggtcttgtccg
cccatgcaaccgtttgaccccgcaaagatgcttacagactctgggaagcttcaaacactt
gatgtgctgctgaaacgcttgcgtgctgaaaaccatcgtgtgctcctctttgctcaaatg
acgaaaatgttgaacatacttgaggattacatgaactatagaaaatataggtaccttaga
cttgatggatcttccacaataatggatcgtcgagacatggtcaacgacttccagcatcgg
aacgacatatttgtgttcttgctgagcacaagggctggtgggcttggaatcaatttgacc
gctgctgatactgtcatattttatgaaagtgattggaatccaacgttggatttacaagca
atggacagagctcaccgtctgggtcaaactaaggatgtctctgtttatcgcttaatatgt
aaagaaacagttgaggaaaaaattttgcagagagctagtcagaaaagcaccgtgcagcag
cttgtcatgacgggtggccatgttcagggtgatcttttggctcctgaagatgttgtatca
ttgttaatagatgatgctcaactcgaacaaaaattaaaagaagtttcgcaacaggctaaa
gataggcaaaaaaagaaaggtggaacaaaggggatacgagttgatgccgaaggaggtggt
gcatctattgaggattttacaaaccctggatatggtagtgaatctgagcttcctgaaccc
gataaaccaaaacctaccaacaaaaagagaaaagctgcaacgggcaagcaggtggagcaa
aaatcaaggccacaaaagagttctaagattgtgacctcatcgtctccgaactcaatgata
atggactatgaacacgatgttctgatgcaaaacagcgacagcctgcagcaggaaagacca
aagaggttgaaaagaccgactaagagcttaaatgaaaccattgagcctgcatttacagct
atccctcctgtatttcaagaccagaatcaaatcgcaccagttccctga
DBGET
integrated database retrieval system
