Henckelia pumila: 140874056
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Entry
140874056 CDS
T11037
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
hpum Henckelia pumila
Pathway
hpum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140874056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hpum04121
]
140874056
Ubiquitin system [BR:
hpum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
140874056
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Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_Zer-1
LRR_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
140874056
NCBI-ProteinID:
XP_073133434
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Position
1:complement(80725264..80727955)
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AA seq
379 aa
AA seq
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MRETGEGLGLNFEKLMVFGDVEGVDENENMVCQVGGGLCGGSKISEWKDIPVELLLRILS
LVDDPTVIVASGVCHGWRDAISWGLTHLSLSRCKKNMNDLVLSLVPRFTKLQVLILRQDS
PQLQDVAVETIAKHCGDLQELDLSKSFRLTDRSLYALADGCPNLVKLNISGCSAFNDTAV
AYLSGFCRKLKILNLCGCVKAASDRALKAIGYNCDQLQSINLGWCDRVGDEGVKSLAYGC
PDLRALDLCGCVLITDESVIALANNCRHLRSLGLYYCKNITDRAMYSLAHSRVKNKHEMW
ASVKKNRYEEEGLTNLNISQCTSLTPPAVQALCDSFPALHTCSGRHSLIISGCLSLTSVH
CVCAVQAHRTTPAMAHLAH
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaacaggggagggtctggggttgaattttgagaagctgatggtttttggtgat
gtcgagggtgtggatgaaaatgaaaatatggtttgtcaagtgggaggaggtctttgtggg
ggatcgaagataagtgagtggaaagatattccagtggagcttttgttgaggattctttct
ttggtggatgatcccacggtgattgtggcatctggtgtttgtcatggatggagggatgcc
atttcttgggggctcactcatctctccctctctaggtgcaagaagaacatgaatgatctg
gtgctatcactggttccgagattcacaaaacttcaggtccttatcttgcgacaagactcg
cctcaacttcaggatgttgctgttgaaacaatcgcaaaacattgtggtgacctccaagag
ttggatctgagcaagagtttcaggcttactgatcgttccttgtatgccttagcagatggc
tgccctaatctcgtgaagctgaacataagcggctgttcggctttcaacgatactgctgtg
gcgtatttgtctgggttttgccgaaagttgaaaatcttgaatctctgtggatgtgtcaag
gctgcctcagatagggcactgaaggccattggatataattgtgatcaattgcagtcgata
aacctaggatggtgtgaccgagttggtgatgaaggggtcaagagcttagcctatggttgc
cccgatctccgagctcttgacttgtgtggatgtgttcttataacagatgagagtgtgatc
gccttggcaaacaactgccggcatctgcgatccctcggtttatactactgcaagaatatc
accgacagagccatgtattctctggcgcatagccgagtgaaaaacaagcatgaaatgtgg
gcatccgtgaagaagaacaggtacgaggaggaaggccttacgaacctgaacatcagccaa
tgcacttcccttactccgcctgcagtgcaggcactctgtgactcatttccagctcttcat
acatgttccggtcgccattcccttattatcagtgggtgcctgagcttaacgtcggttcat
tgtgtatgtgctgttcaagctcaccgtaccacacctgcgatggctcatctagctcactga
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