Henckelia pumila: 140874636
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Entry
140874636 CDS
T11037
Name
(RefSeq) RNA-binding protein Y14A
KO
K12876
RNA-binding protein 8A
Organism
hpum Henckelia pumila
Pathway
hpum03013
Nucleocytoplasmic transport
hpum03015
mRNA surveillance pathway
hpum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140874636
09122 Translation
03013 Nucleocytoplasmic transport
140874636
03015 mRNA surveillance pathway
140874636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpum03019
]
140874636
03041 Spliceosome [BR:
hpum03041
]
140874636
Messenger RNA biogenesis [BR:
hpum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
140874636
Spliceosome [BR:
hpum03041
]
Complex C
Other components
EJC/TREX
140874636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
Motif
Other DBs
NCBI-GeneID:
140874636
NCBI-ProteinID:
XP_073134087
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All DBs
Position
1:complement(128978285..128981513)
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AA seq
199 aa
AA seq
DB search
MANIEAEAVDFEPEDDDLMDEDIVEGSPNRGAASIPRLKSAITGGGSSSAPKKTKGRGFR
DEAAAEADRNARMSARFDSLDSDGGPGPERSIEGWIILVTGVHEEAQEDDLQNAFGEFGE
IKNLHLNLDRRTGFVKGYALIEYEKFDEAQRAITEMDGTELLTQPINVDWAFSKGPFRRR
NLRRRSPRGHRSRSPRRRF
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacatcgaagctgaggcggtggatttcgagccagaggatgacgatctcatggat
gaagatatcgtggaaggttctccgaaccgtggagcagcctccatcccgcggctgaagtcc
gccatcaccggcggaggctcgtcttcagctcccaagaagaccaagggtcgcggcttccgc
gacgaggctgctgctgaggcggaccgaaatgcccggatgtctgctcgcttcgactccctc
gactccgacggcggccctggccccgaacgatctattgaaggatggattattctcgttact
ggagttcatgaagaggcgcaagaggatgatttacaaaatgcttttggtgaatttggcgag
attaagaatttacacttgaatcttgatcgacgtactgggttcgtcaagggctatgcactt
atcgaatacgagaagtttgatgaggctcagagagctattacagaaatggatggaactgaa
ctgctgacacagcccataaatgttgattgggctttcagcaaaggcccattcaggaggagg
aatctgcgaaggagatcacctcgaggtcaccggtccagaagtcctagaagaaggttttga
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