Henckelia pumila: 140876402
Help
Entry
140876402 CDS
T11037
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4
KO
K11644
paired amphipathic helix protein Sin3a
Organism
hpum
Henckelia pumila
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hpum03036
]
140876402
Chromosome and associated proteins [BR:
hpum03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
140876402
REST complex
140876402
Heterochromatin formation proteins
Other heterochromatin formation proteins
140876402
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
140876402
NCBI-ProteinID:
XP_073136450
LinkDB
All DBs
Position
1:complement(157642723..157655334)
Genome browser
AA seq
1364 aa
AA seq
DB search
MKRARDDVFMNSQNKRPVISSRAQPSGQAQMVTPSSTQRLTTNDALTYLKAVKDIFQDNR
DKYDDFLDIMKDFKAQRVGTSGVILRVKELFKGHRHLILGFNAFLPVGYEITLPMEDEPL
PKKKPVEFDEAINFVNRIKARFQGDDHVYKAFLDILNMYRKDNKSITEVYQEVSVLFRGH
ADLLVEFTHFLPDTSGDVSVHYTQSDRDCILPRDDRGSPMTIARPNLVDKNVDHTDSDQW
NWVEKVERKEDGDQNEWEREDNFSHKRKSARKDDSVTDQVYQGMQEPVPSFCEKVKERLQ
DPINFEKFSDCVRSYKTKFITSSQFRVLVASLLGTHPDLMEECEDFIIYVEKTGCLGNNK
TIVRSLKVEDRDAYDHDGEGMDKNKDRDIRESDRYDRGIAFNPKDVSGHRMSLYASKEKL
MAKSIHELDLTDCESCTPSYRLLPQNYPISLASHRTEIGAKVLNDRWVSVTSGSEDYSFK
HMRKNQYEESLFRCEDDRFELDMLLESVNATTKHVEELLDSVNVNTSMTDNSFRVEDHLS
ALNLRCIERLYGDHGLDVMDVLRKNALLSLPVILTRLKQKQEEWARCRSEFNKVWAEIYA
KNYHKSLDHRSFYFKQQDTKNLSAKALLAEIKEMSEKYQNESEMLLSIGAGYRQPKQPHM
EFEYSDPEIHEDLYQLMKYSCGEVFTAEQHDKIMTIWTTFLEPMFGVPARPHSTDSEDIK
HSNCVTKDVADIGVEVNGSPLGKAASGNCKSVDLLKSGDKTIPTEQSSSGKEQIGNGGDG
VNMDGSPNADYSSYKSDVCIASKNAVMQTDCGIMSAASGASKQAGVFEQGASAKSGINEE
HNSNRQNGPDVANSNYPIVAMLAEESQDDGSTRPTSSSTTMVHEEVKAQNCNEETEGSTK
SEREEGELSPTRDLEQNNLAPFEIICTKVAQTPFISAGITKRTEEEKCNEVAEETEANAD
DEDEMSTKGSSDGENLSENVDASESESADGVECSPEEPDEDGEHNENDCKMESDGDVGGA
VNAHDTEGLTAFTDRFSQNAKPLTMKVPVGLLGKAKNSEIFYGNDSFYLLFRLHQMLYER
MHSAKLHSLSPENKWRISSDVNPTNSYARFKDSLHSLLNGSSDNAKFEDDCRAIIGAQSY
ILFTVDKLIHKLVKQLLTIATEEMENKLLHLCAYERSRDPEKFSDAIYHENACFLIPEDN
LYRIECLASPRHLTIQLMKNENDKLEVTAVSMDPSFVTYLNDVLLSVPPERKEKPGVFLK
RNKRKCTTGDEIYDVQKSMEGLVIYNGLESKVACNTLKAAYVLDTEDFLYRMGKRRKISN
QNGSCTDAVNGASNGVSNGASNGYSHRVKRFRSFNAPVPRSCTY
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atgaagagggctagagacgacgtgttcatgaattctcagaataagcggcctgttatctcc
tctcgagctcaaccgtccggccaagcccagatggtaaccccaagcagcacacagaggctg
acaacaaatgatgcattgacgtatctgaaggctgtgaaggatatttttcaagacaatagg
gataaatacgatgattttcttgacatcatgaaagatttcaaggcacaaagagttggtaca
tcaggtgttatattgagagtgaaggaattatttaaagggcatcgacacctaattttgggg
ttcaatgcttttctccctgtgggatatgaaatcactctcccaatggaggatgaaccgctt
ccaaaaaagaagccagtagagtttgatgaagctatcaactttgtaaacagaatcaaggct
agatttcaaggtgacgatcatgtatacaaagctttccttgatattttgaatatgtacaga
aaagataataagtcaataaccgaggtttatcaagaggtttcagttctttttcggggccat
gctgacctacttgtagagttcacacattttctaccagatacttcaggtgatgtgtctgtc
cattatactcagtctgatagagattgcatactaccacgggatgatagaggctctcccatg
actattgcaaggccaaatctagttgacaagaatgttgatcacactgattcggatcagtgg
aattgggttgaaaaagtggaaagaaaagaagacggagaccaaaacgagtgggaacgcgag
gacaattttagtcataaacgaaaatctgctcgcaaagatgattctgtgacagaccaggtt
taccaagggatgcaagagccagtgccatctttctgtgagaaagtgaaggaaagattacag
gatccaattaatttcgagaaattttcagattgcgttcgttcctacaaaacaaaattcatc
acgtcatctcaatttcgtgttctggtggctagtttactagggactcatccggaccttatg
gaagagtgtgaagatttcataatttacgttgagaaaactggatgcttggggaacaataaa
actattgttagatctttaaaggtggaagatcgagatgcatatgatcatgacggagaaggc
atggataaaaacaaagatcgtgatatcagagaaagtgatagatatgataggggtattgcc
tttaaccctaaagacgtttcaggacacaggatgtctttatatgcaagcaaagagaagttg
atggctaaatccattcatgaacttgatctcaccgactgtgagagctgcaccccaagttat
cggcttcttccgcaaaattatccgatttcattagcaagtcatagaacagagattggtgct
aaagtgctgaatgatcgctgggtgtctgtcacttcaggaagtgaggattattcattcaaa
cacatgcggaaaaaccaatatgaggaaagcttgtttcgttgcgaggatgataggtttgaa
cttgacatgttgttggaatctgtgaacgcaacaacaaagcacgttgaagaactcttggac
agtgttaacgttaatacaagtatgacagacaattcatttcgcgtggaagatcatttgtca
gctcttaatctgcggtgcattgagcgtctatatggggatcatgggcttgatgtgatggat
gtattaaggaagaatgctttgctttccttgccagttatactaacccggttgaagcaaaaa
caagaagaatgggctaggtgtcgctctgaatttaataaagtttgggctgaaatttatgcg
aagaactaccacaaatcactagaccatcgaagcttctattttaagcagcaggatacgaag
aacttaagtgctaaagcattgttagctgagatcaaagaaatgagtgaaaagtaccagaat
gaaagtgaaatgcttctctcaattggtgctggatataggcaacctaaacaacctcatatg
gaatttgagtattccgatcctgaaatccatgaagacctttatcagctcatgaaatattcg
tgtggagaagtttttacagctgaacagcatgacaaaatcatgactatttggacaaccttc
cttgagccgatgtttggtgttcctgcccgtccacacagcactgactctgaagatatcaag
catagcaattgtgtaaccaaagatgtggcagatattggtgtagaagtgaatggtagtcct
cttggtaaggcagcttcaggaaactgcaaatcagtggacctgttgaaaagtggtgataaa
actattccaaccgagcaatctagctccggcaaagagcagataggaaatggtggtgatggg
gttaatatggatggttctcctaatgcagattattcctcttataagagtgacgtctgtatt
gcatcaaaaaatgcagtgatgcagactgattgcggtataatgtctgctgcgtcaggggct
agcaaacaagctggtgtctttgagcaaggtgcttctgccaaaagtggcatcaatgaggaa
cataattcaaataggcagaatggacctgatgttgccaattctaattatccaatagtggcg
atgcttgctgaagaatctcaggatgatggtagtacaagacctacttcatcttcaactacg
atggtgcatgaagaagtaaaagctcagaactgtaatgaagaaactgaaggtagcaccaaa
agtgaacgagaagagggtgaattatcaccgacgagagatcttgaacagaataatttagca
ccatttgaaattatttgcaccaaagtagcacaaaccccttttataagtgctggaatcaca
aaaagaactgaagaagaaaaatgtaatgaggttgctgaagaaactgaggctaatgctgac
gatgaagatgaaatgagtactaagggctcatcagatggtgagaatctctctgaaaatgtt
gatgcttcagaaagtgagtcagccgatggagttgagtgttcccctgaagagcctgatgaa
gatggagaacacaatgagaatgattgcaagatggaaagtgatggagatgtaggtggcgca
gtgaatgcccatgacactgaagggctgacggcatttaccgatcgtttttcacagaatgca
aaacctcttacaatgaaagtacccgtgggtttactgggcaaagcgaagaattcagaaatt
ttttatggaaatgattccttctatttgttgttcaggcttcaccagatgttgtatgaaaga
atgcatagcgccaagctgcactctttatctcctgaaaataaatggaggatttcaagtgat
gtgaatccaactaattcgtatgctagatttaaggattctctgcacagtttactgaatggc
tcatctgataatgcaaagttcgaggatgactgccgagccataattggtgctcaatcatac
atcctttttaccgtagacaagctgatacataaacttgtcaagcagctactaacgattgca
acagaggaaatggaaaacaaactcctccatctatgtgcatacgagagatccagagatcct
gaaaaattttcagatgcaatttatcatgagaatgcctgttttcttattcctgaagataac
ttgtatcgaatagaatgtttggcttctccaaggcatctaaccatccagctcatgaaaaat
gagaatgataaacttgaagtgactgctgtctccatggatcccagtttcgtcacatatctg
aatgacgtcctcttatcagttcctccagaaagaaaggaaaaacctggggtattcttgaag
agaaataaaagaaaatgcacgactggggatgagatttatgacgtgcagaaatccatggaa
ggacttgtaatctataatggcctggaaagcaaggtggcttgcaatactttgaaggcggct
tatgttttagacacagaagacttcctctatcggatgggaaaaaggaggaagatctcaaat
cagaatggctcgtgcactgatgcagtcaatggagcttctaacggtgtttccaatggggct
tccaatgggtattctcaccgagtcaaacgatttcgcagtttcaatgctccggtgcccaga
agttgcacgtattaa
DBGET
integrated database retrieval system
