Henckelia pumila: 140877123
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Entry
140877123 CDS
T11037
Name
(RefSeq) uncharacterized protein isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
hpum Henckelia pumila
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
140877123
Enzymes [BR:
hpum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
140877123
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
140877123
NCBI-ProteinID:
XP_073136751
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Position
2:complement(122711987..122718221)
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AA seq
707 aa
AA seq
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MKEEWGLEKMGRPRNFRKLLNKLCGCVFGQTTGVAQNSGIGAMSPPLGVHLSIQDRHVVV
DNGILQVTLSNPEGIVTGVCYNGIDNLLEVLNDESNRGYWDVVWNALDGSGKAGVFEVIK
ATNFTVIKESEEQVEISFSRPWDPSLEGRLVPLNIDKRFILLRGCSGFYTYAIYEHIGSK
EWPAFSLGETRIAFKLRKDKFHYMALADNRQRNMPLPDDRLPGRGQALVYPEAVLLVNPV
DPELKGEVDDKYQYSCDNKDLNVHGWISVDPPVGFWQITPSDEFRSGGPLKQNLTSHVGP
TTLAVFLSAHYAGDDLVPKFGQGEPWKKVFGPVFVYVNSVMDGENPLSLWDDAKQQLSVE
VQSWPYTFPASEDFQSSDHRGNVRGKLWVLDRYASDDNIPANGAYIGLAAPGEVGSWQRE
CKDYQFWTRADENGYLILISPINCQQDYQFWTRADENGYFSINNIRTGDYNLYAWVPGFI
GDYRNGSSITITPGYDLDMGDIVYEPPRDGLTLWEIGIPDRSAAEFYVPDPDPKYINKLY
ANHPDRFRQYGLWDRYSELYPSQDLVYTIGKSDYGKDWFFAHVNRKKEDNTYQGTTWQIK
FTLESVVDNGTYKLRVALASASLAELQVRINNPDTNRPLFSSGLIGRDNAIARHGIHGLY
RLYNVDIKGASLVEGENTIYLTQPRSASPFQGLMYDYIRLEAPSSDY
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaggagtggggattggaaaaaatgggccgtccccgaaatttcaggaaattactg
aacaaattatgtggatgtgtatttgggcaaactacaggtgttgcgcaaaatagtggaatt
ggagccatgtcacctcctttaggggttcatttgtctattcaagatcgtcatgtggtagtg
gacaatggcatacttcaggtcacattatctaacccagaaggaattgttactggagtatgc
tacaacggtattgacaatttgctagaggttctgaatgatgagtctaacagagggtactgg
gatgttgtgtggaatgctctagatggaagtggcaaagcaggagtctttgaagtgatcaag
gcaacaaattttacagttataaaggagagtgaggaacaagtggagatttctttttcaaga
ccatgggatccctctctcgaaggcaggcttgttcccttaaatatagacaaaaggtttatt
ttgctgcgaggctgctctggattctacacttatgcaatatatgaacacattggctcaaag
gaatggcctgctttcagccttggtgaaaccaggattgcttttaaacttcggaaagacaag
tttcactacatggcactggcagacaacagacagagaaacatgccactacccgatgatcga
ttacctggaagaggccaagcccttgtctatccagaggcagtccttcttgttaaccctgtg
gatcctgagctaaaaggagaagttgatgacaagtaccagtactcctgtgataacaaagac
ctaaatgtccatggctggatatcggtagaccctcctgtgggattctggcagatcacccca
agtgacgagttccgttccggcgggcctctcaaacagaatcttacctcccatgtgggaccc
actacgctcgctgtgtttcttagtgctcactatgctggggatgatctggttccgaaattt
ggtcagggcgagccgtggaagaaggtttttggccctgttttcgtctatgttaactctgtg
atggatggagagaaccctttaagcctatgggatgatgcaaaacaacagttgtcagttgag
gtccaaagctggccatacacttttccagcatccgaggacttccaatcatctgaccatcgt
ggtaatgtcagaggaaaattatgggttttagacaggtatgctagcgacgataatattcca
gcaaatggtgcatatattgggttggctgctccaggagaggtgggatcctggcaaagagaa
tgcaaggactatcaattttggacaagagcagatgagaatggctatttaatactgatttca
ccaattaactgtcaacaggactatcaattttggacaagagcagatgagaatggctatttt
tccatcaacaatattcgcactggtgactacaatctctatgcatgggtccctggttttatt
ggagattatcgaaatggaagttccattaccattaccccaggttacgatcttgacatgggt
gatattgtttatgagcctcctagagatggcctgacgttgtgggaaataggcattcccgat
cgttctgctgcagagttttatgttcctgatcctgacccaaaatacatcaacaaactttat
gctaatcatccagacaggtttaggcagtatggactgtgggataggtactccgagttatat
cccagtcaagacttggtgtacacaattggaaaaagtgattatggaaaagattggtttttt
gcacatgttaacaggaagaaagaagacaacacctatcaaggaactacttggcagatcaag
ttcactcttgaatctgttgtcgataatggaacatataaacttcgcgtggcgctggcatca
gcttctctcgctgaactccaggttcgaatcaacaatcccgacacaaaccgtcctttattt
tcaagcggtctgattggaagggacaatgccatcgcgaggcacgggattcatgggctctac
cggctgtacaatgtagatataaagggtgcctcgcttgttgaaggggagaataccatatac
ttgacccaaccaaggagtgcgagtcccttccaggggcttatgtatgattacattaggctt
gaagctccatcctccgactattga
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