Henckelia pumila: 140878826
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Entry
140878826 CDS
T11037
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
hpum Henckelia pumila
Pathway
hpum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140878826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpum03021
]
140878826
03036 Chromosome and associated proteins [BR:
hpum03036
]
140878826
Transcription machinery [BR:
hpum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
140878826
Coactivators
SAGA/TFTC/STAGA complex
140878826
Chromosome and associated proteins [BR:
hpum03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
140878826
STAGA complex
140878826
TFTC complex
140878826
SAGA complex
140878826
SLIK complex
140878826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
140878826
NCBI-ProteinID:
XP_073138556
LinkDB
All DBs
Position
1:complement(100885973..100891063)
Genome browser
AA seq
546 aa
AA seq
DB search
MSIVPKESIEVIAQSLGITNLSPDVFPALAADVEYRVREIMQESIKCMRHSRRTTLTTDD
VDSALGLRNVEPIYGFASGDPLRFKRAAGHKDLFYIEEKELEFKEVIEAPLPKAPLDTAV
VTHWLAIEGVQPAIPENPPPMAIQSLAMPSDNIKNDYKEDGLPVDIKLPVKHVLSRELQL
YFEKISELTVTRSDSTLFKEALVSLATDSGLHPLVPYFTFFVADEVSRNLNNFSLLFALM
RLVWSLLRNQHIHIEPYLHQLMPSVMTCLVAKKLGNRLSDNHWSLRNFTATLVASICKRF
GHVYHNLQPRVTRTLLHAFLDPSKALPQHYGAIQGLSALGPNVVQLLVLPNLEPYLRLLE
PEMQLEKQKNEIKRHEAWLVYGALMRAAGLCMYYRLKMLPSVFSVLPRTVLKSNAKVVTA
MSNKRKAGIDNTMHQPPAKKLMTDNNMTGGVIQANSVPVDMPGAGGAYPANIRAGDTNLQ
GTRPLGNNNVAGTSGRKELGVGQRLKTLGGVDQEDANAWNLLPLLGEYFGESMSSFVPSP
ALSLFL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgagcatagtaccgaaagaatcgattgaagtgatagcgcagagcttaggcattaccaat
ttatcaccagacgtatttccagctcttgctgctgatgtagagtatcgagttcgagaaatc
atgcaggaatctataaaatgcatgcgacattcgagaagaactactttaacaacagacgac
gttgatagtgcgcttggcttaagaaacgttgagcctatatatgggtttgcttctggggat
cctttgcgattcaagagggctgctggacacaaggatttgttttatattgaagagaaggaa
ttggaatttaaggaggtaattgaagctcctctaccgaaagcaccgctagatactgcagtg
gtcactcattggttggctatcgaaggagttcagcctgcaattcctgaaaatcctcctcct
atggctattcaatcacttgcaatgccttcagataacataaagaatgactacaaggaggat
gggttacctgtagacattaaattaccggtcaaacacgttctttcacgggagcttcagctt
tattttgagaaaatctccgagcttactgtcactagatctgattccaccctgtttaaagaa
gcattagtgagcttggcaactgattcaggactccaccctttagtgccttactttacattc
tttgttgctgacgaggtttctcggaatctgaacaatttttctcttctttttgctttgatg
cgccttgtgtggagccttcttcgaaatcaacatatacacatcgagccatatctgcaccaa
ttgatgccatcagtgatgacatgcttggttgcaaaaaaactaggaaacagactttccgac
aatcactggagtcttagaaatttcacagctaccctggtggcttcaatctgcaagagattt
ggtcatgtttaccacaatctccagccacgtgtgaccagaacgttacttcatgcttttttg
gacccatcaaaagctttgccccaacattatggtgccattcaagggctatcagcccttgga
cccaatgtggttcaattgcttgtgcttcccaatcttgagccctacttacgacttctggaa
ccagaaatgcaacttgaaaagcaaaagaatgaaattaagaggcatgaagcgtggttggtg
tatggtgctctaatgcgtgcagctggcttgtgcatgtattatcgcctgaagatgttgccc
tctgttttctctgtactgccccgtactgtcctgaagagtaatgcaaaagtcgtcactgca
atgtcaaataaacgtaaagcaggcattgataacacaatgcatcagccaccagcaaagaaa
ttaatgacagataataacatgaccggtggggtaatacaagcaaattcagtcccagtggac
atgccaggagcaggtggtgcgtatccggcaaatatcagagcaggcgatactaatttacag
ggtacacgtccattagggaacaacaatgtggccggaacgagtggcagaaaggaactaggt
gttggtcaacgattgaagacattaggaggtgttgatcaagaagatgcaaatgcttggaat
ttgctgccattgttgggcgaatattttggtgaaagcatgtcgtcctttgttccttcccct
gcactatctttgttcttgtga
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