Henckelia pumila: 140879280
Help
Entry
140879280 CDS
T11037
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
hpum Henckelia pumila
Pathway
hpum03015
mRNA surveillance pathway
hpum04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140879280
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
140879280
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hpum01009
]
140879280
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpum03019
]
140879280
03036 Chromosome and associated proteins [BR:
hpum03036
]
140879280
Protein phosphatases and associated proteins [BR:
hpum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
140879280
Messenger RNA biogenesis [BR:
hpum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
140879280
Chromosome and associated proteins [BR:
hpum03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
140879280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Ribosomal_S3Ae
Motif
Other DBs
NCBI-GeneID:
140879280
NCBI-ProteinID:
XP_073139058
LinkDB
All DBs
Position
1:complement(93722810..93729743)
Genome browser
AA seq
514 aa
AA seq
DB search
MNGGDGGEAAAATAGPPAPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKTGNHLATGDR
GGRVVLFERTDTKEHGRNRKDLEKMDFPISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI
NKIRWCQTANGAVFLLSTNDKTIKFWKVQEKKVKKVSEFNVDPFKVSNAASSSVSSSPKQ
YLSNGSYPDRSQNSSRNDGLSLPPVNSLRLPMVITSGETSLVARCRRVYAHAHDYHINSI
SNNSDCETFISADDLRINLWNLEISSQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLA
YSSSKGSIRLIDLRQSALCDSHSKLFEEQEAPGSRSFFTEIIASISDIKFAKDGRHILSR
DYMTLKLWDVNMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRLATGSYS
NLFRVFGCSAGSTEATTLEASKNPLRRQIQTPTRPARSLSSSITRVVRRGSESPGVDSNG
NSFDFTTKLLHLAWHPSENSIACAAANSLYMYYA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggtgatggtggagaggcagcggcagctacggcgggtccaccagcgccgctg
gaatggaaattttctcaggtatttggggagaggacggctggcgaagaagtgcaagaagtt
gatatcatatccgcgattgagtttgacaaaactggcaaccaccttgctactggtgaccgc
ggtggaagggtggttttatttgaaaggactgatactaaagagcatggaagaaatcgaaaa
gatttagaaaaaatggacttcccaataagtcgacatccagagttccgttacaaaactgaa
tttcagagccatgaaccagagtttgattatttgaagagtttggaaattgaggagaaaatc
aataagatacgctggtgccagacagctaatggagctgtctttcttttgtcaactaatgac
aaaaccataaagttttggaaggttcaagaaaagaaagttaagaaagtttctgagttcaat
gtcgatccttttaaagttagtaatgctgcaagttctagtgtgtcttctagtcctaagcag
tatctttctaatgggagctatccggatcgatctcagaactcttcaagaaatgatggactg
tccttgcctcctgtcaattcactgagattgcctatggtaattacaagtggtgagaccagt
cttgttgcaagatgtaggagagtttatgcccatgctcatgactaccatatcaattcaatc
tcaaataacagtgattgtgaaacatttatatcagctgatgatctgagaataaatctctgg
aacttggaaataagcagtcaaagcttcaatattgttgacgtgaagccagcaaatatggag
gacctaactgaggtgataacatcagcagaattccatcctactcattgtaatatgttagca
tatagtagttcaaaaggatccatccgtcttatagatctgcggcaatcagctttgtgtgat
tcacattctaaactatttgaggagcaggaggcgcctggttcgaggtcatttttcactgag
ataattgcctcaatatcagatattaagtttgccaaggatggaagacatattcttagtcgt
gattacatgaccttaaagctgtgggatgtcaatatggattctggtccagtagcaactttc
caggttcatgaatatttaagacccaagctatgcgacttgtatgaaaatgattctattttc
gataaatttgaatgctgcctcagcggtgacggtcttcggctggcaactggttcttacagc
aacctgttccgcgtgtttggttgtagtgcgggcagcactgaagcaaccactttagaagcc
agcaaaaacccgttgagaaggcagattcagacccctacaagacctgccagatccctgagc
agtagcattactcgagttgtgagacgaggctcagaaagtcctggagttgactccaatgga
aattcgtttgatttcaccacaaagctccttcaccttgcatggcacccatcggaaaactca
atagcctgtgctgctgcgaatagcctgtacatgtactacgcataa
DBGET
integrated database retrieval system
