Henckelia pumila: 140879477
Help
Entry
140879477 CDS
T11037
Name
(RefSeq) uncharacterized protein
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
hpum Henckelia pumila
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hpum04121
]
140879477
Enzymes [BR:
hpum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140879477
Ubiquitin system [BR:
hpum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140879477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-rbx1
zf-RING_5
Prok-RING_4
zf-C3HC4_4
zf-RING_6
zf-RING_16
zf-ANAPC11
RING_XB3-XBAT31
zf-RING_10
zf-Nse
DUF1451
Motif
Other DBs
NCBI-GeneID:
140879477
NCBI-ProteinID:
XP_073139286
LinkDB
All DBs
Position
2:104120352..104125155
Genome browser
AA seq
463 aa
AA seq
DB search
METSNSDGSSLDSSASIPSSSINGGSSRTPRFTLMRLLQSPISSLLEYSGVLRVRPDYPY
SEARPLMSENGDVNDLSVGNIQGPSNSGSIDADGGVDGNSNGRGEVSIRIIGEQDRVGVV
NSGENGEGSGVGLTADESMVPREGFNGNGGNSTSDDNNSNNQNREASAYQRYDIQQVARW
AEQILPFSLLLLVVFIRQHFQGFFGVIWITAVLYKSNDILRKQTALKRERKISVLAGYSL
GFLLHVFGIYWWYRKDDLYYSLLMIPPKATPPFWHAVFIILVNDAMVCQTAMVLKLVLLM
YFKDGRGHNFRRQGQLLTLVEYMLLLYRALLPTPVWYRFFLNKEYGSLFSSLTTGLYLTF
KLTSIVEKVRSFIAALKALSRKDIHFGSYATSEQVNAAGDLCAICQEKMHTPILLRCKHI
FCEDCVSEWFERERTCPLCRALVRPADLRSYGDGSTTLLFQLF
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggagacatcaaattctgatggctcgagtttggattcttctgcgtcgattccatcatca
agtatcaacggaggaagctcaagaactcctcgattcactcttatgcggctgctgcagtct
ccaatttcatcgctactggaatattctggggttttaagagtccgacccgattacccttac
tcggaggctcgtcctcttatgtccgagaatggggatgtcaatgacctgagtgttgggaat
attcaaggcccgagcaattcgggttcgattgatgccgatggtggtgtcgatggtaacagc
aatggtcgtggggaagtttcgattcgaataattggtgagcaagatagggttggggttgta
aatagtggtgagaatggggaggggtccggggtgggattgactgcggacgagtctatggtt
cctcgtgaggggtttaatgggaatgggggtaatagtactagtgatgataacaacagtaat
aatcagaatagggaggcatcagcatatcagagatacgacatacagcaagtggctaggtgg
gctgagcagattcttccgttttctttgcttttgttggtggtattcatccggcaacacttt
caaggattttttggtgttatctggatcactgctgttttgtacaagtccaatgatattctt
cggaagcaaacagctctaaagagagagaggaagatttctgtccttgctggttattccctt
ggattcttgcttcatgtttttggaatctactggtggtatcgaaaggatgatctttactat
tcattactaatgattcctccaaaagccaccccacctttttggcatgcagtattcatcatc
ctggtaaatgatgcaatggtgtgccagacagctatggttctcaagttggttttgttaatg
tattttaaggatggtagaggccacaattttcgtagacagggtcagttgttgactctggtt
gagtacatgctgcttctgtaccgtgccctgttaccgaccccggtatggtatagattcttc
ctaaacaaagagtatggcagtcttttttcatcactgacaacagggctgtatttaaccttc
aagcttacatcaattgttgagaaggttcggtcctttattgctgctttgaaggcattatct
cggaaggacattcattttgggtcttatgccacatcagagcaggtgaatgcggcaggagat
ttatgtgctatatgccaggagaagatgcacaccccgattttgttacgatgcaaacatata
ttctgtgaagactgtgtttcagaatggttcgaaagagagaggacttgccctttatgcagg
gcactggttcgacctgccgatcttcgttcatacggggatggatcaactactctgctcttc
cagttgttttaa
DBGET
integrated database retrieval system