Henckelia pumila: 140879478
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Entry
140879478 CDS
T11037
Name
(RefSeq) autophagy-related protein 18d-like isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
hpum Henckelia pumila
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hpum04131
]
140879478
Membrane trafficking [BR:
hpum04131
]
Autophagy
Other autophagy associated proteins
Others
140879478
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_IFT122_1st
BCAS3_WD40
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
WD40_Gbeta
CFAP251_N
Beta-prop_RSE1_2nd
Beta-prop_Vps41
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_IFT140_2nd
WDR55
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
140879478
NCBI-ProteinID:
XP_073139287
LinkDB
All DBs
Position
2:104125558..104129769
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AA seq
418 aa
AA seq
DB search
MTVHSSTMTSAVSTSRGILPPAGYGGHDASIDVVSGPLMQSDSEFNDNDNTELYSVSWNQ
DYGCFAAGTSHGFRIYNCDPFKETFRRDLKSGGFKIVEMLFRCNILALVGSSANAQYPPN
KVIIWDDHQSRCIGEFSFRSEVRAVKLRRDRVVVVLEHKIYVYNFMDLKLLHQIETLSNP
RGICCLSHHLNTSVLACPGLRRGQVRVEHFGLNMTKLINAHDSKISCLTLTMDGLLLATA
SMRGTLIRIFNTMDGTRLQEVRRGVDKADIYSIALSPNVQWLAVSSDKGTVHLFSLRVRV
VGEDSSIASAAAKGFFSQNSSNSLDPLISPSTGANPGSSLSFMKGVLPKYFSSEWSFAQL
HLPECTPFIAAFGSQNSVIIVGMDGSFHRCSFDPANGGLMVQQECTRFLKTETSAPPS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgactgttcactcatccaccatgacatctgctgtttcaacatctagagggatacttcca
cctgcaggatatggtggtcatgatgcatctatagacgtggtttctggccctcttatgcaa
tctgattcggagtttaatgacaatgataatacagagttatattctgtgtcttggaatcag
gattatggttgctttgccgctggcacgagtcatggctttcgtatatacaactgcgatcct
ttcaaagaaaccttcaggcgtgatctaaaaagtggtggatttaagatagttgaaatgttg
tttcgttgcaatattttagctctcgttggcagtagtgccaatgctcaataccctccaaat
aaagttattatttgggatgatcatcaaagccggtgcatcggtgaattttccttcagatct
gaggttcgtgctgttaaactaagacgggatcgtgttgtcgttgttcttgagcacaagata
tatgtttataattttatggatctgaaacttcttcatcaaatagagaccttgtcaaatccc
cggggaatttgctgcctgtcacatcaccttaatacatctgtgttggcttgcccaggtctg
cgacgaggacaggtgcgggtcgaacatttcggtctgaatatgacaaaattaatcaatgct
catgattctaagatttcttgtttgaccttgaccatggatgggcttcttcttgccactgca
agcatgagaggcactctgataagaattttcaacactatggatggaactcgattacaggag
gtacgcagaggggtagacaaagcagatatatacagtattgctttatccccaaatgtacaa
tggttggctgtctcgagtgacaaaggtaccgttcacttatttagtctcagggtgagggtt
gtgggtgaggacagttcaattgcttctgctgctgctaagggtttctttagtcagaactct
tcaaactcccttgatcccctgatttctccaagcaccggtgctaatcctggctcatcatta
tctttcatgaaaggggttttacctaaatatttcagctctgaatggtcatttgctcagtta
cacttgccagaatgtactccattcattgcagctttcggttctcagaactctgtcattatt
gttggcatggatggaagtttccacaggtgcagcttcgatccagcgaatggagggttgatg
gtgcaacaagaatgcacaagatttctcaaaactgaaaccagtgctccgccgagctaa
DBGET
integrated database retrieval system
