Henckelia pumila: 140879498
Help
Entry
140879498 CDS
T11037
Name
(RefSeq) uncharacterized protein isoform X1
KO
K20308
trafficking protein particle complex subunit 11
Organism
hpum Henckelia pumila
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hpum04131
]
140879498
Membrane trafficking [BR:
hpum04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
140879498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Foie-gras_1
TPR_12
Gryzun-like
Gryzun
Motif
Other DBs
NCBI-GeneID:
140879498
NCBI-ProteinID:
XP_073139337
LinkDB
All DBs
Position
2:complement(133472368..133480520)
Genome browser
AA seq
1172 aa
AA seq
DB search
MEEYPEELRTPPVALACVVGCPELHGRITAHLHSQQPPINTLALPDFSNIAIIGAPSPKR
TPNDNPAGILKRDWLSKHRTRIPAVVSALFSADDISGDPAQWLHVCDHLENLKATIRGRN
IKLVLVVVAQSGYKVDTSEDRMITLRKRAEVDAKNLIVFVPDDQLELQQSLSRLGNAIGE
LANIYYKDEGRKIKTRLEKKNFSSMEFNICYCFKVAVYAEFRRDWLEALRMYEDAYHALR
EMVGTSTRLPPIQRLVEIKTIAEHLHFKLSTLLLHGGKFVEAISWFRQHAANYMRLVGSP
EVIFLHWEWLSRQYLVFGQLLETSSANDSHLPSMVSVPTEKATEWEFYPAYYYQLAASYL
KKKKISLDFALSIYDDIGEIDGSSESVVASVYIGQFARLLEREDTYVMQPLTDDEYARYT
LTEGRRFQDSFEIIALFKRAFEAYSNLKSERTAAYCQFQMAREYFSVCDFRNAKEIFDKI
SNLYRQEGWLLSLWDILGYLRECSREISSVKDFIEYSLEMAALPITSNAFDPSSKGCGPA
GPASLSQRAKIHKEAFGVVDGALELSLKEDNSGCKVNSDLPLYLEIDLVSPLRVVLLALV
AFHEQTVKPGASSLITLSLRSRLPINIEVDQLEVQFNQSECNFIIENDQKSHAATIPRSQ
SGLRVETAPALVLATNKWLRLTYEITSGQTGKLECTYIIARMGPQFSICCRAESPASMND
LPLWKFEDQVETIPTKDPSLAFSGLKAIQVEEPEPQVDLILCSCGPALVGENYILPVKVA
SKGHAVYSGELKINLVDTRGSGLLSPREVEPFSADNLHVELIDIYWDGLDDHSESRSDKI
QKIQPSFGLISVPSLVEGESWSCKLKIKWNRPKPIMLYVSLGYYPHNGEPSLQKTHVHKS
LEIEGRIAFTISPRFMLPFRQDPLLVSKIKAAYDPDHIPLALNESNMLIVSAKNCSEVPL
RLLSISVEVGENNGACIVQPHHVEFTEPVIHVPGEEFKKVFTVIPKVNNSRLNIGMVCLR
WQRDSRAGDEVHSWATVSQVTKLKLPDVTVELPPLVVSLECPPHAILGNPFIYSVEVHNQ
TELLQEIKYTLADSQSFVSSGPHSDTIYILPRSAHILRYMLVPLGLGSQQLPRVSVTSVR
YSAGFQPSTVSSVVFVYPSKPTFKVNEMTERQ
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatatcccgaggagctccgcacgccgccggtagcattggcttgtgtggtgggg
tgcccggagctccacggccgcattacggcgcacctccactctcagcaaccgcctatcaat
acactcgccttacccgatttctccaacatcgcaattatcggcgcgccatccccgaaaagg
actcccaatgacaatccagctggtattctgaaaagggattggctttccaagcatcggact
aggattcccgctgttgtttccgcgctattcagcgccgatgatatctccggtgatccggct
cagtggctccatgtctgcgaccatctcgaaaatctcaaggcaaccatacgcggtaggaac
atcaaattggttctggtggtggttgctcagtcaggctacaaagttgacaccagtgaagat
cgcatgattaccttgaggaaacgtgcagaagtagatgcaaaaaatcttattgtctttgta
ccagatgaccagttagagcttcaacaatctctgagcaggcttgggaatgcaattggggag
ttggcaaatatatattacaaagatgaaggtcggaaaattaaaacacgtcttgaaaagaaa
aacttcagctcaatggagtttaatatctgctactgtttcaaagttgctgtatatgcagaa
ttccgcagagactggctcgaagctctcaggatgtatgaggatgcctatcatgcactgcga
gagatggttggaacttcgacaagattgcccccaatccaacgcttagtcgagatcaaaact
attgctgaacatttgcattttaagttgtcaactctattgctgcatggtgggaaatttgta
gaagcaatttcatggttccgtcaacacgctgctaattatatgagacttgtgggatcacca
gaagttatttttcttcactgggaatggttaagcaggcaatatctggtatttggtcaactg
ctggagacaagctcagcaaatgattcacatttaccgagtatggtatctgttcctacagag
aaggcaactgaatgggagttctatccagcatactattatcagttggcagctagctacctg
aagaaaaaaaaaataagtttggactttgcactatctatctatgatgatattggtgaaatt
gatggaagttcagaatctgtggtagcttctgtgtatattggtcagtttgcaagacttctt
gagcgtgaggatacatacgtaatgcaacctctgactgatgatgaatatgctcgttacaca
ctcacggaagggaggaggtttcaagattcctttgaaatcattgccctcttcaagagagct
tttgaagcatacagtaacttgaagtctgagaggactgctgcctattgtcagttccagatg
gctagagaatatttttcagtatgtgattttcgtaatgcaaaagaaatatttgataagatt
tctaatctttatcgacaagagggctggctattgtcattatgggatatcttgggttaccta
cgagagtgctcaagggaaatcagttctgtgaaagacttcatagaatactcacttgaaatg
gctgcactgcctataacaagtaatgcttttgatccatcttccaaaggctgtggaccagct
ggccccgctagtctttcacagagagccaagatacacaaggaagcatttggggttgtggac
ggtgcattggaacttagtttgaaagaagataatagtgggtgcaaagtaaacagtgatctt
cccctttatcttgagattgatcttgtaagtcccttaagggtggttctgcttgctttggtt
gcttttcacgaacaaacagttaagccaggtgcttcatcgctaatcacattatcacttcga
tcacgattgccgataaatattgaagttgatcagttggaggtgcaatttaatcaatcggag
tgtaattttatcatcgagaatgaccagaagtcacatgcggctacaattcctcgttctcag
tctggtctcagagttgagactgctccagctctggtacttgctacgaacaaatggctgcgc
ttgacatatgaaataacatctggccaaactggaaagcttgaatgtacatatataattgca
aggatggggccacaattctcaatatgttgcagagctgaaagtccagcgtctatgaatgat
ttaccactttggaagtttgaagaccaagtagaaactatacccaccaaggatcctagcctg
gcattctccggactgaaggccatacaggttgaagagcctgaaccacaagtggatctaatc
ttatgttcatgtggccctgcattggttggagagaattatattttacctgtgaaagtagct
tctaaaggccatgcagtctattccggtgagttaaagattaatcttgtagatacacgaggc
agtggtcttcttagcccaagagaagtggaaccattttctgcagataatcttcacgttgag
cttattgacatatattgggatggacttgatgatcactctgaatctcgttcagataagata
caaaagattcagccatcatttgggttgatttctgtcccctctctagttgagggggaatca
tggtcatgcaaactgaaaattaagtggaatcgtcccaaacctattatgctctatgtctca
ttgggttactatcctcataacggtgagccaagcttgcaaaaaactcatgtacacaaaagc
ttagagattgaaggcaggattgcttttactattagcccgcgatttatgttgccatttcga
caggacccacttttggtctcgaaaatcaaggctgcttatgatcccgatcacataccttta
gctttaaatgaatcaaacatgcttatagttagtgccaagaattgttcagaagtgccactt
cgattgttgtctatttccgttgaggtaggagaaaataatggtgcatgcatcgtacaacct
catcatgtggagttcacagaacctgttattcatgtgccaggagaagagtttaagaaggtt
ttcaccgtcattcctaaggtaaataattctaggctaaatatcggtatggtgtgtctgaga
tggcaaagggattcaagagccggtgatgaagttcattcttgggctacagtgtcccaagtt
acgaaacttaaactacctgatgtgaccgtcgaactacctccgttggttgtgagtttggaa
tgtccacctcatgccattcttgggaaccccttcatatattctgttgaagtacacaaccaa
acagagttgctccaggagatcaaatacacattagctgattcacaaagttttgtgtcatct
ggaccccacagtgacacgatctatatcctgccaagatcagcacacatactcagatacatg
cttgtccctctaggcttaggttctcagcagcttcctagagtttctgtgacttcagttaga
tactctgctggttttcaaccttcaactgtatcctccgtcgtctttgtgtacccatccaag
cctacatttaaggtcaatgagatgacggagaggcagtaa
DBGET
integrated database retrieval system
