Henckelia pumila: 140879508
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Entry
140879508 CDS
T11037
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
hpum Henckelia pumila
Pathway
hpum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140879508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hpum04131
]
140879508
Membrane trafficking [BR:
hpum04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
140879508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
140879508
NCBI-ProteinID:
XP_073139348
LinkDB
All DBs
Position
2:124248558..124260656
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AA seq
790 aa
AA seq
DB search
MMLNGIDDEEKWLAEGIAGIQHNAFYLHRALDSNNLRDALKFAAQLLSELRTSKLSPHKY
YELYMRAFDELRRLEMFFKDEDRHGCSVVDLYELVQHAGNILPRLYLLCTVGSIYIKSKQ
APAKHVLKDLVEMCRGVQHPIRGLFLRSYLAQVSRDKLPDIGSEYEGEGDTVMDAVEFVL
QNFTEMNKLWVRMQHQGPLREKEKLEKERNELRDLVGKNLHVLSQIEGVDLEIYKDNVLP
RVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLETLLGACSQLQPVVDIKTVLSQLMD
RLSTYAASSPEILPEFLQVEAFSKLSSAIGKVIETQIDMPIVGAISLYVSLLTFTLRVHP
DRLDYVDQVLGACVKKLSGKPKLEDSRATKQVVMLLSAPLDKYNDTVTALTLSNYPHVMD
HLDAGTNKVMAMVIIRSIMKNKTSVSSSDKVEVLFELIKGLIKDLDGMATDELDEEDFNE
EQNSVAGLMHVLYNDDPEEMLKIIYTVWKYISVGGPKRLPFTIPPLVFSALKLVRRLHGQ
DGDVAGEEVPATPKKIFQLLNQVIEALSVVPSPELALRLCLQCAEAANDCDLEPVAYDFF
TQAFVLYEEEIADSKAQVTAIHLIIGTLQRMNVFGVENRDTMTHKATGYSAKLLKKPDQC
RAVYACSHLFWFDDQDGIKDGERVLLCLKRSLRIANAAQQMANVTRGSSGPVTLFVEILN
KYLYFFEKGNPHITGGLIQSLVELIKTEMQSDSTTPNRTSDNFFASTLRYIQFQKQKGGV
MGEKYSPITT
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatgttaaacggaatcgacgacgaggaaaaatggctggcagaaggcatcgccggaatt
cagcataacgccttctatttgcatcgagctctggactcgaataacctcagagatgcgttg
aaattcgccgcgcaattgttgtcggagctacgaacgtcgaaactctcgcctcacaaatat
tacgagctttatatgcgagcttttgatgagttgaggaggctggaaatgttcttcaaggac
gaagatcggcatggttgttcagtggttgacctttatgaactagttcagcacgctgggaac
attttacccaggctgtatctcttgtgtacagttggatccatttacataaagtcaaaacag
gctcctgctaagcatgttttgaaggatcttgttgagatgtgtcgtggagttcaacatcca
atacgtgggctctttttgaggagttatcttgctcaagttagcagagacaagttgccagat
atcggttcagagtatgaaggtgaaggcgacactgtcatggatgctgtagaatttgtactt
caaaatttcaccgagatgaataagctttgggtacggatgcagcatcagggacctctaagg
gagaaagagaagcttgaaaaggaaaggaacgaactacgtgatcttgttgggaaaaattta
catgttctcagtcagatagagggtgttgacctcgaaatatataaggacaatgttcttccg
agagtgttggagcaggtggttaattgtaaggatgaacttgcccagtattatttgatggat
tgcataattcaggtctttccagacgagtaccatttgcagacccttgagacattattaggt
gcctgctcccaacttcagccggtggttgacatcaaaacagttttgtcacaattgatggat
agattgtcaacctatgccgcttcaagtcctgaaatattaccagagtttttgcaagttgaa
gcattttccaagctgagcagtgccattggaaaggtcatcgaaacacagattgacatgcca
atagttggtgcaatttctttatatgtctcccttctgactttcactcttcgggtacatccc
gatcgattggattatgtggatcaagtgctgggagcgtgtgtcaagaaattatccgggaaa
ccaaagcttgaagatagcagagcgacaaaacaagttgttatgcttctgagtgctccacta
gataaatacaatgataccgtcactgctcttactctatcaaattatccccatgtcatggat
caccttgatgctggaacaaataaagttatggcaatggttattatcagaagcattatgaaa
aataagacttctgtctcaagttctgacaaggttgaggttctatttgaactgattaaaggg
cttataaaagatttagatggaatggcaacagatgagcttgatgaagaggatttcaacgag
gagcaaaactctgttgctggacttatgcacgtgttgtataatgatgacccagaagagatg
ttaaagataatctatactgtgtggaaatatatatctgttggaggtcccaaacgcttgcct
ttcaccatcccacctcttgttttttctgccctcaagttggttagaagattgcatgggcaa
gatggggatgtagctggagaagaagttccagctactccaaagaaaatttttcagctgttg
aatcaggtcattgaggcactttcagttgttccatcacctgaattggcgttgaggctgtgc
ttacaatgtgctgaggcagctaatgactgcgatcttgaacccgtggcttatgactttttc
acgcaagcttttgtactatacgaggaagaaatcgcggattctaaagcccaggtaactgct
atacacctaataattgggacacttcagagaatgaatgtatttggtgttgaaaacagagac
acgatgacacataaggctactgggtattcagccaaacttttaaagaagcctgatcaatgt
agagcggtttatgcttgttcgcatctgttctggtttgatgatcaggatggcatcaaagat
ggagaaagggttttgctttgcttaaagcgatctcttcggatagcaaacgctgctcaacag
atggcaaatgttacaaggggtagcagtggacctgtgacgctcttcgttgaaatactcaac
aagtacctatattttttcgaaaagggaaaccctcatataactggtggtctcattcagagc
cttgtagagttgatcaagactgagatgcagagtgacagcacgactccgaatcgaacttct
gataattttttcgcgagcacattgcgttacattcaattccaaaaacaaaaaggaggcgtc
atgggcgagaaatacagcccaataacgacttaa
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