Henckelia pumila: 140879757
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Entry
140879757 CDS
T11037
Name
(RefSeq) TATA-box-binding protein 2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hpum Henckelia pumila
Pathway
hpum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140879757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hpum03000
]
140879757
03021 Transcription machinery [BR:
hpum03021
]
140879757
Transcription factors [BR:
hpum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
140879757
Transcription machinery [BR:
hpum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
140879757
RNA polymerase III system
TFIIIB
140879757
RNA polymerase I system
SL1/TIF-1B
140879757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
140879757
NCBI-ProteinID:
XP_073139746
LinkDB
All DBs
Position
2:24055557..24060551
Genome browser
AA seq
201 aa
AA seq
DB search
MADPQGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAA
VIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIV
GSCDVKFPIRLEGLAYAHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRD
ETYTAFENIYPVLTEFRKVQQ
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccgcaaggtctggaagggagccaaccagttgatctatccaagcatccttct
ggaattgtcccaactctacagaatattgtctcaacagtcaatttggactgcaaattggat
cttaaagctatagctttacaagctcgcaatgcagagtacaaccccaagcgttttgctgct
gtgatcatgaggatcagagaacctaaaacaactgcactgatttttgcttctggaaaaatg
gtctgtacaggtgcaaagagtgaacaacagtcaaaattggctgctcggaagtatgctaga
attattcagaagcttggtttccccgcaaaatttaaggatttcaagattcagaatatagtt
ggttcctgcgatgttaaatttcctattcgacttgaaggccttgcttatgcgcatggtgcc
ttttcaagctatgaaccagaacttttccctggattaatataccggatgaaacagccaaag
attgtgttacttatttttgtgtctgggaaaattgtcctaacaggagcaaaggtcagagat
gaaacttatactgccttcgagaatatttatcctgttctcactgaatttcgcaaagttcag
caatga
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