Henckelia pumila: 140879789
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Entry
140879789 CDS
T11037
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
hpum Henckelia pumila
Pathway
hpum04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
140879789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hpum04121
]
140879789
Ubiquitin system [BR:
hpum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
140879789
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_NXF1-5
LRR_At1g61320_AtMIF1
LRR_8
Motif
Other DBs
NCBI-GeneID:
140879789
NCBI-ProteinID:
XP_073139793
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Position
2:complement(15132184..15135708)
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AA seq
581 aa
AA seq
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MAYAFPEEVLEHVFSFLSSDKDRNAVSLVCKSWFEIERWCRRRIFIGNCYAVTPKIVIRR
FPDVRVLELKGKPHFADYNLVPEGWGGYVYPWIVAMSGAYPLLEEIKLKRMVVSDESLEM
ISKSFKNFKVLVLSSCEGFTTEGLASIAANCRNLRELDLGESEVEDLSGHWLTHFPDNYS
SLVSLNISCLGSEVNFSVLERLVVRCPNLTTLRLNRAVPLEKLPILLQHAPQLSDLGTGA
YFADIRPDIFSNLADAFSLCKQLKSLSGFWDVVPAYVPAMYCVCSGITSLNLSYATIQSM
DLIKLVSQCPNLQRLWVLDYIEDIGLEAIAASCKDLQELRVFPSDPFGNEPNVSLTEQGL
VAISEGCPKLQSVLYFCRQMSNAALLAIAKNRPNLIRFRLCILEPRAPDYLNLEPLDNGF
GAIVENCKELRRLSLSGLLTDKVFECIGTHAKKLEMLSIAFAGNSDLGLHHVLSGCESLR
KLEIMDCPFGDQALLANAGKLETMRSLWMSSCSVTVGACKLLGQKMPRLNVEVIDESGPP
DSRPESCPAGKLYVYRTVAGQRVDMPGFVWTVDADAGLRFS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacgccttcccggaggaggttctggagcacgttttctcgttcctgagctccgac
aaggatcggaacgcggtctcgttggtgtgcaagtcgtggttcgagatcgagaggtggtgc
cggaggaggattttcattggaaattgctacgctgtgacgccgaagatcgtgatccggagg
ttcccagatgtgcgggtgctggagctgaaggggaagccgcacttcgcggactacaacctc
gtgccggagggttgggggggttacgtgtacccctggattgtcgccatgtccggagcttat
ccccttctggaggagatcaagcttaaacggatggtagtgagtgatgagagcctggagatg
atctcgaagtcgtttaagaatttcaaggtcttggtgctctcttcgtgcgaaggtttcacc
accgaaggtctagcttctatagccgcaaattgcaggaatctccgagaattagacttggga
gagagtgaagtggaggacttgagtggtcattggctaactcattttccagacaactattct
tcactagtgtctcttaatatatcttgcttggggtcagaggtgaatttttctgtcttggag
cggttggttgtgcgatgcccaaatctgacaacacttaggctaaaccgtgctgtgcctctt
gagaagctacctattctacttcagcatgcaccccagttgtctgatctaggtactggggca
tactttgctgacattcgcccggacatcttctcaaacttggcagatgccttttcactttgc
aagcaactaaaaagcttgtcaggtttttgggatgtggttcccgcatatgttccagcgatg
tattgtgtttgctctggaattacttccttgaatttgagttatgccactattcaaagcatg
gatctcatcaagcttgttagccaatgcccgaacttgcagcgactgtgggttctggattac
atagaagacatcggtcttgaagctattgctgcatcttgcaaggacctgcaagagcttcgt
gtatttccttcagatccttttggaaatgaaccaaatgtatctttgacagaacaagggctt
gtcgctatatcagagggctgccccaaacttcaatctgttttatatttctgccgccagatg
tcaaatgctgcattacttgcaatagcaaaaaatcgcccaaatttgatccgcttccgtttg
tgcattctcgagcctcgagcccctgattacttaaaccttgaaccactggataacggtttt
ggggctattgtagaaaactgcaaggaactgcgtcgcctttctctctcgggcctcctcaca
gataaagtatttgaatgtattgggacacatgctaagaaattggagatgctctctattgcg
tttgctgggaatagcgacttgggcctccatcatgtgttgtctgggtgtgaaagtcttcgg
aaattggagataatggactgcccgtttggggatcaggcactcttggccaatgctgggaag
ctggagacaatgcgatccctttggatgtcttcttgctcggtaactgttggagcatgcaag
ttacttggtcagaagatgccccgactcaatgttgaagtgatagacgagagtggaccccca
gattctaggcccgaaagctgccctgctgggaaactttatgtttacaggacggttgcggga
caaagggtggatatgcctggttttgtttggacagtggatgcagatgcaggcttaaggttt
tcgtga
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