Henckelia pumila: 140880240
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Entry
140880240 CDS
T11037
Name
(RefSeq) protein argonaute 4
KO
K11593
eukaryotic translation initiation factor 2C
Organism
hpum Henckelia pumila
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpum03019
]
140880240
03036 Chromosome and associated proteins [BR:
hpum03036
]
140880240
Messenger RNA biogenesis [BR:
hpum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
140880240
Chromosome and associated proteins [BR:
hpum03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
140880240
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
140880240
microRNA pathway
RISC loading complex
140880240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
140880240
NCBI-ProteinID:
XP_073140623
LinkDB
All DBs
Position
2:17232947..17239728
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AA seq
911 aa
AA seq
DB search
MDPSEPNGNGVSEELPPPPPVPPNVTPLKAESEQPIKKALLVPMARRGVGSRGNKIPVLT
NHFQVKVTNSEGYFFHYSVALFYEDDRPVEGKGIGRKVLDRVQDTYGSELAGKQFAYDGE
KTLFTVGPLPRNKLEFTVVLEDVTSNRNNGNGSPGKHDSPNESDKKRMRRPYNSKTIKVE
ISFAAKIPIQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDVDNFT
DVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIVRPGPVVDFLIANQNVKDPFSIDWAK
AKRVLKNLRIRTSPTNQEFKITGLSERPCKDQTFTLKQKGKHGDGECETVEVTVYDYFVN
QRNMDLRYSADLPCINVGKPKRPTYFPIELCSLVSLQRYTKALSTFQRASLVEKSRQKPQ
ERMSVLRNALKINNYDAEPMLRSCGVSINSNFTQVDGRVLPTPKLKVGNGEDLYARNGRW
NFNNKKLIEASKIEQWAVVNFSARCDVRALIRDLIKVGDMKGISVEPPFDVFEENPQFRR
APPHVRVEKMFEEIQGKLPGPPKFLLCLLPERKNCDVYGPWKRKNLSEFGVVTQCLSPTR
INDQYLTNVMLKINAKLGGLNSMLAGELASTIPLVSKVPTLILGMDVSHGSPGQSDVPSI
AAVVSSRQWPQISRYRACVRTQSPRVEMIDSLFKRVSDTEDDGIIREVLLDFYTSSGKRK
PDQIIIFRDGVSESQFNQVLNIELSQIIEACKFLDEKWSPKFVVIVAQKNHHTKFFQPNS
PDNVQPGTVIDNKVCHPRNYDFYLCAQAGMIGTTRPTHYHVLLDEVGFSPDDLQELVHSL
SYVYQRSTTAISIVAPICYAHLAASQLGQWMKFEEASETSSSHNGTAPGGGPAVPQMPKL
KENVRNSMFFV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggatccatctgaaccaaatggtaatggtgtttcagaggagctgcctcctcctccacct
gttccaccgaatgttactccactgaaagctgaatcagaacaacccattaaaaaggctcta
cttgttccaatggccagacgaggtgtgggatcgaggggaaataagattcctgtcctcact
aatcatttccaagtgaaggttaccaattccgagggatacttcttccattacagtgttgcc
ctattttacgaagatgatcgtcctgttgagggcaagggaattggtaggaaagtgcttgat
cgagtccaggatacctatggttctgagttggctggcaaacaatttgcttacgatggagag
aaaaccttattcaccgtgggccctcttccgcgcaacaaacttgagtttactgttgtccta
gaggatgtaacatcaaatcggaacaatggaaatggtagcccagggaagcacgacagtcct
aatgaaagtgacaagaaaaggatgcgccgaccctataattctaaaacaattaaagtcgaa
ataagttttgctgctaaaattccaatccaggccattgcaaatgccttacgtggccaggag
tctgaaaactcgcaggaagctttaagagtgctggacatcatcttaaggcaacatgctgca
aaacaaggttgcctgctggtccgccagtcattctttcacaatgatgtggataactttact
gatgtgggaggtggtgttcttggttgccgagggttccactccagcttccggactacccag
agtggattatcattgaacattgatgtgtccacaactatgattgtgcggcctgggcccgtt
gtagactttctgattgcaaaccaaaatgtaaaagaccccttttctattgactgggcaaag
gccaaacgcgtgcttaagaatttgagaattcggacgagtcctactaaccaagagttcaag
ataactggattaagtgagaggccttgcaaagatcaaacattcacattaaagcagaaaggt
aagcacggtgatggtgaatgtgaaaccgtagaggtgacagtttatgattacttcgtcaac
caacgaaacatggacttgcgatattctgctgatttaccttgcatcaatgtgggaaagcca
aaacgccccacgtacttccctattgagttatgctccttggtgtcattgcaacgctataca
aaggctctttccacctttcaaagagcttctttggtggagaaatcacgacagaaaccacaa
gagaggatgtctgtgctgagaaatgctttgaaaatcaataattacgatgcagaacctatg
cttcgttcttgtggcgtttctatcaacagtaactttacacaggtcgatggccgtgtactt
ccaacaccaaagttgaaagttggtaatggagaagatttatatgctcgtaatggaagatgg
aatttcaacaataagaaacttattgaagcaagtaagatagaacaatgggctgttgtaaac
ttctccgctcggtgtgatgtacgtgccttgatcagagatttgatcaaagttggagacatg
aaaggaataagcgtggaacctccgtttgatgtctttgaagaaaatcctcagtttagaaga
gctccacctcatgtgagggtggagaaaatgtttgaggaaattcaggggaagcttcctggc
cctcccaagttccttctttgtctacttccagagcggaaaaactgtgacgtatatggtccc
tggaaacgaaagaatctttcggaatttggtgttgttactcaatgtctctctcccacaaga
atcaacgaccagtatctaactaatgtcatgttgaaaataaacgccaagcttggtgggtta
aattcaatgttagctggcgagcttgcttctacgattcctcttgtatctaaggttcctaca
ttaattcttgggatggacgtatctcatggctcacctggccagtctgatgtcccttcaatt
gcagcggtggttagctcgaggcagtggccccagatttctcgctatagagcttgtgttcgc
acacaatcaccaagggttgaaatgatagattctcttttcaaacgtgtgtctgacactgaa
gatgatggcataatcagggaagttctgcttgatttctatacaagttcggggaagagaaag
ccggatcagattattattttcagagacggtgtcagtgaatctcagttcaatcaagtcctg
aatattgaactcagtcaaattatagaggcatgtaagttccttgacgagaagtggtcacca
aagtttgtggtaattgtagctcagaagaaccaccataccaaattttttcagccaaattct
ccggataatgttcagcctggtactgtaatagataataaagtctgtcatcctaggaactac
gacttctacttgtgtgcacaggctggaatgattgggacgacacgcccaactcactatcac
gtgttgttggatgaggttggtttctcgcctgatgatcttcaggagcttgttcattccctt
tcttacgtgtaccaacgaagcaccactgctatatccattgttgctcccatttgctacgct
cacttggccgcctcacagttaggccaatggatgaagttcgaagaggcatccgagacatct
tccagccacaatgggacagcacctggtggagggccggctgttccccagatgcctaagttg
aaggagaatgtgcgaaactctatgttttttgtctga
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