Henckelia pumila: 140880311
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Entry
140880311 CDS
T11037
Name
(RefSeq) eukaryotic initiation factor 4A-8-like isoform X1
KO
K03257
translation initiation factor 4A
Organism
hpum Henckelia pumila
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpum03019
]
140880311
03012 Translation factors [BR:
hpum03012
]
140880311
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hpum04147
]
140880311
Messenger RNA biogenesis [BR:
hpum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
140880311
mRNA cycle factors
Stress granule specific factors
140880311
Translation factors [BR:
hpum03012
]
Eukaryotic type
Initiation factors
eIF-4
140880311
Exosome [BR:
hpum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140880311
Exosomal proteins of bladder cancer cells
140880311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
DUF8050
Motif
Other DBs
NCBI-GeneID:
140880311
NCBI-ProteinID:
XP_073140740
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Position
2:complement(39030723..39034360)
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AA seq
449 aa
AA seq
DB search
MRNMLHTRIEPATRGNFFPRHLGPYQLAYAPVGAFYMASLAPEGSQFDARQYDSKLNELL
QADGQEFFTSYDEVYDSFDVMDLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQA
QSGTGKTATFCSGILQQLDYGLTQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVG
GTSVREDQRILSAGVHVIVGTPGRVFDMLRRQSLGADYIRMFVLDEADEMLSRGFKDQIY
DIFQLLPSKVQIGVFSATMPPEALEITRKFMKKPVRILVKRDELTLEGIKQFYVNVEKEE
WKLETLCDLYETLAITQSVIFVNTRRKVDWLTEKMRSRDHTVSATHGDMDQNTRDIIMRE
FRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFLT
TDDEKMMHDIQKFYNVVIEELPSNVGDLL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatatgctccacacgaggatcgaacccgcaacgcgtgggaatttcttcccacgt
cacctcgggccttaccaactcgcctatgcccctgtgggcgctttttatatggcaagtttg
gcaccagaaggatctcaatttgatgctcgtcagtatgactcaaagttgaatgagttgctt
caagctgatggacaagaattttttacatcatatgacgaagtttacgatagttttgatgtc
atggatctccaagagaacctccttagaggcatttatgcttatggtttcgagaagccatct
gccatccagcaaagaggaatagttccattctgtaagggactcgatgttattcagcaggct
cagtctggaacagggaaaactgcaaccttttgttcaggcatattgcagcagctagattat
ggtttgactcaatgccaagccttggttttggcaccaaccagagaacttgctcaacaaatc
gagaaggttatgcgagcacttggtgactaccttggcgtgaaggttcatgcttgcgttggt
ggaactagtgttcgtgaggaccagcgtattctttcagccggtgtacatgtcattgttggt
acccctggtcgtgtgtttgacatgctgcgtagacagtcacttggtgctgattatatcaga
atgtttgtattggatgaagcagatgaaatgttgtctcgaggttttaaggatcagatatat
gacatcttccagttactgccgtctaaagttcaaatcggtgtattctctgctacaatgcct
cctgaagccctcgaaatcaccagaaagttcatgaaaaagcctgttcgaattttggtgaaa
cgggatgagctaactctagagggcatcaagcaattctacgtgaatgttgaaaaggaagaa
tggaagttagaaacactatgtgatctttatgaaacactagccatcacccagagcgtcatc
tttgttaacacaagacgaaaggtcgattggttgactgaaaaaatgcgaagccgtgaccac
acagtctcagcaacacatggagacatggaccagaacactcgggacattatcatgcgtgaa
tttcgatctggctcatctcgtgtccttatcacaactgatctcttggctcgtggaatcgac
gttcagcaagtatctctggtcataaactacgatcttccgactcaaccggagaattatttg
catcgtattgggagaagtggaagatttggaaggaaaggagtttccataaacttcttgact
acggatgatgagaaaatgatgcatgatattcaaaagttctacaatgttgtcattgaagaa
ctcccgtccaatgttggtgatcttctttga
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