Henckelia pumila: 140880421
Help
Entry
140880421 CDS
T11037
Name
(RefSeq) long chain base biosynthesis protein 2a
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
hpum Henckelia pumila
Pathway
hpum00600
Sphingolipid metabolism
hpum01100
Metabolic pathways
hpum04382
Cornified envelope formation
Module
hpum_M00094
Ceramide biosynthesis
hpum_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
140880421
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
140880421
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hpum01007
]
140880421
Enzymes [BR:
hpum01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
140880421
Amino acid related enzymes [BR:
hpum01007
]
Aminotransferase (transaminase)
Class II
140880421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
140880421
NCBI-ProteinID:
XP_073140946
LinkDB
All DBs
Position
2:83442151..83446347
Genome browser
AA seq
489 aa
AA seq
DB search
MITIPYVTALTTYFSYGLLFAFGQLRDFFRKIVDRVSHSSLQGYAPICLGLEDFYIRRLY
LRIQDCFNRPISSPPDAWFDVVERVSKDNNKTLQRTTRVTRCLNLGSYNYLGFAAADEYC
TPRVIESLKFFFPSTCSTRADGGTTKLHTELEDCVANFIGKPAAIVFGMGYVTNSAILPV
LIGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNTPSHLEKVLREQIADGQPRTHRPWK
KIIVVVEGIYSMEGELCKLPEIVSICKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDTA
DVDIMMGTFTKSFGSCGGYIAGSKELIDYLKYTCPAHLYATSISPPAAQQIISSIKVILG
EDGSSRGAQKLAKIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLK
RNVAVVTVAFPATPLLLARARICISAAHSKEDLVKALEVISSVGDLVGIKYFPAEPTKQP
LEGDRIKLE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccatcccctacgtcaccgccttgaccacctatttcagctacggcctcctcttc
gctttcggccagctgcgcgattttttccggaagattgtcgatcgggtgtctcacagcagc
cttcagggttatgcgcccatctgtttggggctcgaggatttctacattcggcggctgtat
ttacggattcaggattgctttaacagaccgatatcaagccctcctgatgcttggtttgat
gtggtggagcgtgtctccaaggacaacaacaaaactctgcagcgaacaacaagagttact
aggtgcctcaacttggggtcatataactatctggggtttgctgcagcagatgaatactgc
acacctcgggtaattgagtccttgaaattttttttcccgagcacctgtagtacccgggct
gatggaggtacgaccaaattgcatactgaattggaggactgtgtagcaaatttcatagga
aagccagctgccatagtttttggcatgggttatgtgacaaattctgccattcttcctgta
ttaattgggaagggaggtttgatcatcagtgattcattgaaccataactctatagtgaat
ggtgcacggggatctggggcaactgttcgagtctttcagcataacactccatctcatttg
gagaaggttttgagggaacaaattgcagacggacagcccagaacacacagaccttggaag
aagataattgttgtggtggagggaatctacagcatggaaggtgaactgtgcaagctcccc
gaaattgtctccatatgtaagaagtacaaggcatatgtttatctggatgaggctcacagc
attggtgctgttgggaaaactgggaggggtgtctgtgaactattgggagttgacacggca
gatgtggacattatgatgggaactttcactaaatcatttgggtcctgtggtggttatata
gcaggatctaaggaacttattgattacttgaaatacacatgccctgctcatctttatgca
acatcaatatcaccgccagctgcacagcaaattatttcttccattaaagttattcttgga
gaagatggttctagcagaggggctcagaaactggcaaaaatacgtgagaacagcaacttt
ttcaggtcagaattgcagaaaatgggttttgaagtcctcggagataacgattcccctgta
atgcccataatgctctataacccggcaaaaattcctgctttttcacgagagtgcctgaaa
cggaatgtggctgtggtcacagttgcgtttcctgctactcctttattgttggcccgtgct
cgcatttgcatttccgctgctcattcaaaggaagaccttgttaaagctttagaggttatc
agcagtgtaggtgaccttgtaggcattaaatactttcctgccgagcctacgaaacagccg
ttggagggtgacagaattaagctggagtga
DBGET
integrated database retrieval system
