Henckelia pumila: 140880429
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Entry
140880429 CDS
T11037
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
hpum Henckelia pumila
Pathway
hpum04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
140880429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hpum04121
]
140880429
Ubiquitin system [BR:
hpum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
140880429
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_NXF1-5
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
140880429
NCBI-ProteinID:
XP_073140961
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Position
2:147527132..147530783
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AA seq
581 aa
AA seq
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MAYSFPEEVLEHVFSFLGSDKDRNAVSLVCKSWYEIERWCRRRIFVGNCYAVAPEIVIRR
FPEVRAFEMKGKPHFADFNLVPEGWGAYMDPWISAMSVAYPFLEEIKLKRMVVTDDSLEL
ISKSFKNFKVLVLSSCEGFTTDGLASIAANCRNLRELDLRESEVEDLNGHWLSHFPDNYT
SLVSLNMSCLHSEVNLSTLERLVARCPNLKTLRLNRAVPLEKLPNLLRRAPQLVDLGTGV
YSAEIRSDTFSNLAEAFSTCKQLEGLSGLWDVVPSYLPAMYSVCFGITSLNLSYATIQSS
DLVKLVGQCRNLQRLWVLDYIEDSGLEVVAASCKDLQELRVFPSDPFGGEPNVSLTERGL
VCVSEGCPKLQSVLYFCRQMSNAALMAIARNRPKMIRFRLCIIEPRAPDYTTLAPLDAGF
GAIVENCKDLRRLSLSGLLTDRVFNYIGTHAKKLEMLSIAFAGDSDLGLHHVLSGCDSLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGQKMPMLNVEVIDESGPP
DSRPDSWPVEKLYIYRTVAGRRLDMPDYVWTKDEERELEFS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcgttcccggaggaggttctcgagcacgttttctccttcctcggctccgac
aaggatcggaacgccgtttcgttggtgtgcaagtcttggtacgagatagagcggtggtgc
cgccgccgcattttcgtggggaactgctacgccgtcgcgccggagatcgtgatccggagg
tttccggaggtgagggcgtttgagatgaaggggaagcctcatttcgccgacttcaacctc
gtgccggagggttggggtgcgtatatggacccgtggatctccgcgatgtcagttgcgtac
cctttcctcgaggagatcaagctcaagcgcatggtggtgacggacgacagcttggagctg
atctcgaagtcgtttaagaacttcaaagtgctggtgctctcgtcttgtgagggttttacg
actgacggtctcgcgtcgattgctgctaattgcaggaatcttcgagagcttgacctgagg
gaaagtgaagtggaggatttaaatgggcattggcttagtcattttcctgacaactatacc
tcactggtgtcgctgaatatgtcttgcttgcactctgaggtgaatttgtccaccttggaa
agactggttgcacgttgtcctaacctgaagacgcttcggctcaatcgtgctgttcctctc
gagaagctccccaatctacttcgccgtgcacctcagttggttgacttgggtaccggtgtc
tattcggctgaaatccggtctgacacattctctaacttggcagaagcattttccacttgt
aagcagcttgaaggcctgtcaggtctttgggatgtggttccatcttatcttccagccatg
tattccgtctgcttcggaatcacgtcactgaacttaagttatgcaaccattcaaagttcc
gatctggtcaagcttgttggccagtgtcgaaatttacagcgtctatgggttctggattac
attgaagatagtggacttgaagttgttgcagcgtcttgcaaggatctgcaggaacttcgg
gtgtttccctcagatccttttggtggagaaccaaatgtatctctgactgaacgggggctt
gtttgtgtctcagagggctgccccaaacttcaatcagttctttatttctgccgccagatg
tcaaatgctgctttgatggctattgcaaggaatcggcccaagatgatacgcttccgactg
tgtatcatcgagcctcgagcccctgattacacaaccctcgcaccacttgatgctggtttt
ggagccatcgtggagaattgcaaggatttgcggcgcctctccctttctggcctcctcact
gatcgagtattcaactatattgggacacatgctaagaaactggagatgctttccatagct
tttgcaggggatagtgacttgggcctgcatcatgtattgtctgggtgtgatagcctccgg
aaactggagatcagagactgtccattcggggacaaggctcttttggccaatgctgcaaag
ctggagacaatgcgatccctttggatgtcttcttgctcagttagttatggagcatgtaag
ctgcttggtcaaaagatgcctatgctcaatgtcgaagtcatcgatgaaagtgggccgcct
gattcgaggcctgatagctggcccgttgagaaactctacatctaccggacggttgctgga
cgaagacttgacatgcccgattacgtctggacaaaggatgaagaaagggaattggaattt
tcttaa
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