Henckelia pumila: 140880477
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Entry
140880477 CDS
T11037
Name
(RefSeq) probable U3 small nucleolar RNA-associated protein 7
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
hpum Henckelia pumila
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpum03009
]
140880477
Ribosome biogenesis [BR:
hpum03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
140880477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
WD40
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
WDR55
Beta-prop_VPS8
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_Nup120_160
DUF6848
Motif
Other DBs
NCBI-GeneID:
140880477
NCBI-ProteinID:
XP_073141062
LinkDB
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Position
2:complement(101816855..101825257)
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AA seq
535 aa
AA seq
DB search
MEEKVENDSILNPVSAVEQGNDDEDTKVKKYLRGEGTNLEVLKDKKLKGQLAAREEVYGK
TANVAARAEKYLMPGESGYLEPDGIEKTWRIKQEELAGEVDILSRIKQHDIVSPDLGPYT
LDFTSSGRHMVVAGRKGHLLLLDMKCMDLIKEIQVRETVRDAVFLHNQKLFAVAQKKYVY
IYGDNGTELHCLKEHGAALKLQFLDKQFLLASVNEFGQLHFQDITTGQMVGNFRTGLGRS
GVMKANPWNNVISVGHSGGTITMWKPTSAAPLVKMLCHHGPVTALAFHPNGHLMATSGME
RKIKIWDLRKYEVLQTIPFQAKTLDFSQKGLLAAATGSFVQILGDFSGSQDYSRYMTHTM
AKGYQIHKVLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETRKQRNEKEVHS
LLDKLPPETIMLDPTKIGSLRPMRKKELLTRKEKEAEMEAAIEDAKNISFKKKTKGRSKS
SKMAKKKQESVAKAKKTLLEEQVNDEKSSKKKRKRIEENNQLPLSLQRFARKGAP
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaagtagaaaatgatagtatattaaatccagtgtccgcagtggagcaggga
aatgatgatgaggacacgaaggttaaaaaatatctcagaggcgaaggaacaaatttagag
gttttaaaagataagaaattgaaaggtcagctagctgcaagggaagaagtgtatggaaag
actgccaatgttgctgcccgggctgagaaatacctcatgcctggggagtcaggttatttg
gaaccagatggtatagagaaaacatggaggataaagcaggaggaacttgctggtgaggtg
gacatcctgagtcggataaagcaacatgacattgtctcgccagaccttggtccatacact
ctggatttcacgtcaagtggtcgacatatggtagtagctggacgtaaaggtcatctactc
cttctagacatgaaatgtatggatctcattaaagagattcaggttagggaaacagtgcgt
gatgcagtcttcttgcacaatcagaaactttttgcagttgctcaaaagaagtatgtatat
atatatggagataatggtacagaacttcattgcctgaaggaacatggtgctgcacttaaa
cttcagtttctcgataaacagttcctcttggcatccgtaaacgaatttgggcaacttcat
tttcaagatatcaccacgggtcagatggtaggcaattttcgaactggtcttggtcgctct
ggggtcatgaaggcaaatccctggaacaatgtaatatctgttggtcattctggtggcaca
ataaccatgtggaaacctaccagcgctgctccactcgtcaagatgttgtgtcatcacggg
ccagttacagctttggcattccaccccaatggtcatctaatggcgacctctggaatggag
aggaaaataaagatttgggacttgagaaaatatgaggttctccaaacaataccattccaa
gccaaaaccttggattttagtcagaaaggtttgcttgctgctgccactggatctttcgtc
cagatattgggagatttctctggctctcaggactatagccgttacatgacgcataccatg
gctaaaggctatcaaatacataaggtgttgtttagaccatacgaagatgttttgggcatc
gggcactccatgggttggtcttcaatcttgatacctggatcaggtgaacccaattttgat
tcttgggtcgctaaccctttcgaaacacgcaaacaaagaaacgagaaagaagtgcactct
cttcttgataaacttccacctgagacaatcatgttggacccgacgaagattggttcattg
aggcctatgagaaagaaagaattgctcaccagaaaagagaaggaagcagagatggaggct
gccattgaagatgctaaaaatatttctttcaaaaagaaaactaaaggtagaagcaagtca
agtaaaatggcaaagaagaagcaagaatctgttgcgaaagccaagaaaactctcttggag
gaacaagttaatgatgagaaatcctccaaaaagaagaggaagagaattgaagagaacaat
caactacccctgtccttgcagcgttttgcccggaaaggtgcgccgtga
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