Henckelia pumila: 140880530
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Entry
140880530 CDS
T11037
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
hpum Henckelia pumila
Pathway
hpum04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
140880530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hpum04040
]
140880530
Ion channels [BR:
hpum04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
140880530
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GFIT
Motif
Pfam:
Ion_trans
DUF6525
Motif
Other DBs
NCBI-GeneID:
140880530
NCBI-ProteinID:
XP_073141159
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Position
2:complement(25105136..25113208)
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AA seq
778 aa
AA seq
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MDPSEKDETPMLATTFIQSDYDSDATVRHFSTRTRSASMSLPSNYMDSSEDVNRLVGFTG
PLRNERRNIAVQMTGPLYASRNHEVVFQPPQGALLQQNTESKVERYPSSIDGMANIHWSS
DDYGGKNEHLLKSGQLGMCNDPYCTTCPTYYNAKGRQKHSRTSEIFDPKFHHMIYGDAKG
WAKRMRSFLLPYIPGVMNPHALFVQRWNKFFVISCLFAVFLDPLFFFLLSVKQDNKCIVL
DWPLTTTMVVLRSMTDFIYLLHILLQFRLAYVAPESRVVGSGDLVDDPKRIARNYLYGYF
IIDVFVVLPLPQIIILLILPHSLGSSGANYAKNLLRTGILVQYIPRLFRFLPLLAGQSAT
GLIFESAWANFVINLLTYVLASHVVGSLWYLLGLQRVNQCLRDACHDSKLARCMEFIDCG
HGIDFEDFKKDATWEPWKSNANATACFGKDAFDYGIYQTVVNLTTRRSVVTRYVYSMFWG
FQQISTLAGNQVPSYFVWEVIFTMSIIGIGLLLFALLIGNMQNFLQALGRRRLEISLRRR
DVEQWMSHRRLPEELRKQVRGAERFNWAATRGVNEAMLMENLPEDLQREIRRHLFKFVKK
VRIFQMLDEHIIDAICERLRTKTYIKGSKILYRGGLIDKMVFIIRGNLESVEDLNVVPLS
EGDVCGEELLTWCLEHSSVNKDGRRIRIPGHRLLSNRLVHCLTNVEAFVLRASDLEEVTS
LFARFLRSPRVQGAIRYESPYWRGLAARRIQVAWRYRKKRRISRGDEAEGSGIRTDIS
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggatccttctgaaaaagatgaaacaccaatgctagcgaccacattcatacaatcagat
tatgacagcgacgcaacagttcgacatttttcaaccaggacgaggagtgcgtcaatgtct
cttccttctaactatatggactcttcagaagatgtgaacaggctcgtgggtttcacaggt
cctttgagaaatgaaagacgaaatattgcggtacaaatgactggccctttatatgcctcc
cgtaaccatgaggttgtctttcagcctccccaaggtgcattacttcagcaaaatacggag
tctaaagttgaaaggtatccttcttctattgatgggatggctaatattcattggtcatcg
gatgactatggtggaaaaaatgaacatctgttgaaatcgggtcaactggggatgtgtaac
gacccttactgcactacatgcccaacttattataatgctaaagggcgtcaaaagcactca
agaacatcagagatatttgatcccaagtttcatcatatgatctatggagatgcaaaaggt
tgggccaagagaatgcgttcgtttctgcttccttatattcccggagtcatgaatcctcat
gcactatttgttcagcggtggaacaagttttttgtgatatcttgcttgttcgctgtattt
ttagacccactgttcttttttcttctctctgtgaagcaggataacaagtgtattgtgtta
gattggcccctgacaacaacgatggtggtcttgcggagcatgactgacttcatttatttg
cttcatatccttcttcagttccgattggcttatgttgctcctgaatctagagttgtggga
tctggagatttagttgatgatcctaaaaggattgcccggaattatctttatggatatttc
atcatcgatgtctttgttgtacttccccttccacagatcatcatattattgattctacca
cattccttgggatcatctggagccaattatgcaaaaaatctgctacgcacaggcatactt
gttcagtatattcccaggcttttcagattcttaccattgcttgctggtcagtcggctact
ggcttgatttttgagtcagcatgggcaaattttgtcataaatcttctcacctatgtcttg
gctagccatgtagtgggctcactatggtatctattaggcctacagagggtgaatcaatgc
cttcgagatgcctgccatgactcaaaacttgcgagatgcatggaattcattgactgcgga
cacggtattgattttgaggattttaagaaagatgcaacatgggagccatggaagagcaat
gcaaatgctactgcatgttttggaaaagacgcttttgattatggaatttatcaaactgtc
gtaaatctaaccactcgtcgtagtgtagtgacaagatatgtgtactcaatgttttgggga
tttcagcaaattagtaccctggctgggaatcaagttccgagctattttgtgtgggaagtt
atcttcacgatgtccatcatcgggataggcctgctgctttttgccctgttaatcggaaat
atgcagaatttcctccaggctcttggacgcaggcggttagagatatcgttaagacggcga
gatgttgagcaatggatgagccatcgtcgattgccagaggaactgagaaagcaagtccga
ggagcagagcgttttaactgggctgccactcgaggagtgaatgaagcaatgctaatggag
aatttaccagaagaccttcaaagagaaattaggcgtcatctctttaaatttgtcaagaaa
gtccgaatatttcaaatgttggatgaacatatcatagatgctatatgtgagaggctaagg
acaaaaacatatatcaaaggaagcaaaatcttgtaccgcggcggccttattgataaaatg
gtgtttataatacggggaaatttggagagtgtcgaagatctcaatgttgttcccttgtct
gaaggggatgtttgtggagaagaactccttacatggtgccttgaacattcttctgtaaat
aaagatggaagaagaatcaggatcccaggacacaggctgctgagcaataggctggtccat
tgcttgacaaatgttgaagcatttgtgctgcgagcatctgatcttgaagaagttaccagt
ctttttgcaagattcttgagaagcccacgagttcagggagccattaggtatgaatcacct
tactggcgaggacttgcagccagacgaatacaagttgcatggaggtacaggaaaaaacga
cgtattagtcgtggagatgaggcagaagggtctggaattcgaactgatatatcatag
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