KEGG   Henckelia pumila: 140880746
Entry
140880746         CDS       T11037                                 
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
hpum  Henckelia pumila
Pathway
hpum03022  Basal transcription factors
hpum03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hpum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    140880746
  09124 Replication and repair
   03420 Nucleotide excision repair
    140880746
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hpum03021]
    140880746
   03400 DNA repair and recombination proteins [BR:hpum03400]
    140880746
Transcription machinery [BR:hpum03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     140880746
DNA repair and recombination proteins [BR:hpum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     140880746
SSDB
Motif
Pfam: Ssl1 C1_4 VWA_2 Zn_ribbon_GTF2H2 VWA IBR Tfb4
Other DBs
NCBI-GeneID: 140880746
NCBI-ProteinID: XP_073141549
LinkDB
Position
2:complement(89078909..89084737)
AA seq 421 aa
MSYNETNGEDIRINREEDDDDEEGDGRGLDAWERTYADERSWESLQEDESGLLRPIDNKT
LQHAQYRRRLRTATSIRIQKGLIRYLYIVLDLSRAASEMDYKPSRMVVVARQVEAFIREF
FDQNPLSQLGLVTLKDGVAHSLTDLGGSPESHIKVLMGKLECSGDASLQNGLDLVHNLLN
QIPTYGHREVLILYSALSTCDPGDVMEAIQKCKSSKIRCSVIGLSAELYICKCLCQETGG
SYYVGLDEPHLKELILEHAPPPPAIAEFAIPNLIKMGFPQRAAEGVISICSCHKEAKSGG
GYICPRCRARICELPSECRICGLTLVSSPHLARSYHHLFPITPFDDVPPLVSNNPRKLPK
NCFGCQQSLLNPGNLPAPCVSCPKCKQHFCLDCDIYIHESLHNCPGCEGFPNSKSIDSME
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgtcgtacaatgaaactaatggtgaagatatacgaattaacagagaagaggacgacgat
gatgaagaaggagatggtaggggccttgacgcatgggaaaggacttatgcagatgagaga
tcttgggagtctcttcaagaggatgaatctggccttctccgccctattgacaacaaaacc
cttcaacatgctcaatatcgtcgacggcttcgcacggcaacatctatacgaattcagaaa
ggcctgattcgttatttgtacattgtccttgatctatctcgagccgcgtcagagatggat
tacaaaccgagtcgaatggttgtggttgctcgacaagtggaggctttcatcagggagttc
ttcgaccaaaatcctttaagtcaacttggtttagtgacattaaaagatggagttgcgcat
agtcttacagatcttggtggaagtcctgagtcccatatcaaagtgttgatgggtaagttg
gaatgctcaggcgacgcgtcgctccaaaatggtcttgatcttgtacacaacctcttgaat
caaatcccaacctacggtcaccgtgaagttcttattttgtattctgctcttagtacttgt
gatccgggtgatgtaatggaagccatccagaagtgcaagagttctaaaatcaggtgctca
gttattggtctctctgctgagctttacatatgcaaatgtctctgccaagaaactggtgga
tcatattatgttggcctagatgagcctcatttaaaagagttaatccttgagcatgcgccg
ccgcccccagctatagcagaatttgctattccaaatctgatcaagatgggttttccccaa
agagctgcagaaggtgtgatctcaatatgttcttgtcataaagaggctaagagtggtggg
ggatatatttgcccaagatgcagagcacgcatctgtgaacttcccagtgaatgtcgaata
tgtggactgacactcgtttcctcaccccatttggcaagatcttaccaccacctctttcct
atcacaccatttgatgatgtaccaccactggtgtcaaacaatccacgcaaactgccgaaa
aattgttttggttgccagcaatctctcctgaatcctggaaacctcccagccccttgcgtt
tcttgtccaaaatgcaagcaacatttttgcctcgactgtgatatttacattcacgagagc
ctgcacaattgtccgggttgtgagggcttcccgaattccaaatccatcgattctatggaa
ggatga

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