KEGG   Henckelia pumila: 140880894
Entry
140880894         CDS       T11037                                 
Name
(RefSeq) ras-related protein RABF1
  KO
K07887  Ras-related protein Rab-5A
Organism
hpum  Henckelia pumila
Pathway
hpum04144  Endocytosis
hpum04145  Phagosome
hpum04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:hpum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    140880894
   04145 Phagosome
    140880894
   04148 Efferocytosis
    140880894
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hpum04131]
    140880894
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hpum04147]
    140880894
   04031 GTP-binding proteins [BR:hpum04031]
    140880894
Membrane trafficking [BR:hpum04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    140880894
 Endosome - Lysosome transport
    140880894
Exosome [BR:hpum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   140880894
  Exosomal proteins of other body fluids (saliva and urine)
   140880894
  Exosomal proteins of colorectal cancer cells
   140880894
  Exosomal proteins of bladder cancer cells
   140880894
GTP-binding proteins [BR:hpum04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    140880894
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 AAA_7 AAA_16
Other DBs
NCBI-GeneID: 140880894
NCBI-ProteinID: XP_073141851
LinkDB
Position
2:101067925..101072271
AA seq 199 aa
MGCSSSVPDKNAGRLGGLNAENGGSNDVNNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPT
SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPES
FTKAQYWVKELQKHGSPDIVMALVGNKADLLEKREVPVQDGNDYAEKNGMFFIETSAKTA
DNINQLFEEIAKRLPRPSS
NT seq 600 nt   +upstreamnt  +downstreamnt
atgggttgctcgtcatccgttccagataaaaatgctggaaggttgggaggtctaaatgca
gaaaatggaggatcgaatgatgtgaataaccttaaagttaagctggtgctcttaggtgat
tctggggttgggaaaagctgcattgttctccggtttgttcgtggtcagtttgatcctacg
tccaaggtcactgttggggcatctttcttgtctcagacaattgccttgcaagattcaact
acagtgaaatttgaaatatgggacactgctggtcaagaaaggtatgccgcactggcgcct
ctgtattaccgaggtgctgctgttgccgtagtggtgtatgatatcactagtcccgaatca
ttcaccaaggcacagtactgggtcaaggagttgcaaaagcatggaagcccagacatagtc
atggctctcgtaggtaataaagctgatcttcttgaaaaaagagaagtgccagttcaggat
ggaaacgactatgctgaaaagaacggaatgttctttatagagacctctgccaagactgct
gacaatataaaccagctatttgaggaaattgccaagagactgccacggccatcttcatga

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