Henckelia pumila: 140881326
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Entry
140881326 CDS
T11037
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
hpum Henckelia pumila
Pathway
hpum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140881326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hpum04121
]
140881326
Enzymes [BR:
hpum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140881326
Ubiquitin system [BR:
hpum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
140881326
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
140881326
NCBI-ProteinID:
XP_073142634
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All DBs
Position
2:127806340..127809108
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AA seq
319 aa
AA seq
DB search
MEPSIECISVLEGMHEDEILNAHSFSQFSTSKPFSHNNNLNGGLTTPPASVHELLECPVC
TNSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLELPCKHSSL
GCPEIFPYYSKLKHEAICNFRPYNCPYAGSECSIAGDIPRLVSHLRDDHKVDMHSGCTFN
HRYVKSNPRDVENATWMLTVFHCFGQYFCLHFEAFQLGGAPVYMAFLRFMGDEMEARNFS
YSLEVGGNGRKLIWEGTPRSIRDGHRKVRDSHDGLIIQRNMALFFSGGDKNELKLRVTGR
IWKEPQNPDGGACIPNLCS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaacctagcattgaatgcatatcagtccttgaagggatgcacgaagatgagatcctt
aacgcccattcattttcgcagttttcaacttcaaagccattctctcacaataataatctc
aatggtgggttgactactccgcccgcaagtgttcacgagcttcttgaatgccctgtttgt
accaattctatgtaccctcccatccatcagtgccacaacgggcatacactgtgttccact
tgtaaagtaagggtgcacaacagatgtcctacttgtagacaggagcttggcgatataaga
tgcttagcacttgaaaaagtggctgaatcccttgaacttccttgcaagcatagctccctt
ggatgccctgaaatcttcccttactacagtaaactgaaacatgaagccatttgtaatttt
aggccttacaactgcccttacgcgggatcagagtgctccatcgctggtgatattccacgc
cttgtttcccacttgagagatgatcacaaggtggacatgcattcaggatgcacgtttaat
catcgttacgtgaaatcaaatcctcgagatgtagagaatgcgacatggatgctaacggtc
ttccattgttttggtcagtatttttgccttcattttgaagctttccaactcggaggtgcc
cctgtatatatggcttttcttcggttcatgggagacgagatggaggctcggaactttagc
tacagtctggaggttggaggaaacggtaggaaacttatatgggagggcacccctcgaagc
attagagatggtcaccgaaaggttcgagacagtcatgatggcctcatcatacagcgcaac
atggcactttttttctcaggaggagacaagaacgagcttaagcttcgtgtaaccggtcgt
atatggaaggaaccacagaatccagatggtggagcttgcatacccaatctctgtagttaa
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