Henckelia pumila: 140881360
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Entry
140881360 CDS
T11037
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
hpum Henckelia pumila
Pathway
hpum04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
140881360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hpum04121
]
140881360
Ubiquitin system [BR:
hpum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
140881360
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
DUF3630
Motif
Other DBs
NCBI-GeneID:
140881360
NCBI-ProteinID:
XP_073142700
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Position
2:complement(97116935..97121276)
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AA seq
592 aa
AA seq
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MDQGSKKSKFSPPRNLGNSKASVTLHSSLFPDEVLEKVVSFIDSHKDRSSVSLVCKDWYN
AERWTRSKLFIGNCYSVSPEIVARRFPRIKSVTLKGKPRFSDFNLLPRDWGADVHSWLVM
FAEVYPFLEELRLKRMAINDESLEILAKSFPGFKALSLCSCDGFTNKGLKAIATHCRNLT
ELDIQDIATDDFSGDWLTCFPENFSSLEILNFACLNSEIEFDKLERLVSRCSSLSVLKVN
ESISLDQLQRLLVLAPQLKELGTGSFFPELTPRQYHEVESAFRNVRNLQTLSGLWDATAS
YLPVLYGTCASLSFLNLSDAALQSAAFEKLLAHCPNLRRLWVADTVEDKGLEAVGLRCPL
LEELRVFPSDPYDQHQRHGVTELGFVAVSRGCRKLHYVLYFCRRMTNAAVETIVNNCPDF
THFRLCIMNPGEPDYLTNEPMDEAFGSVAKTCTKLQRLSVSGLLTDLTFEYIGKYAKNLE
TLSVAFAGSSDRGMQCVLEGCPKLRKLEIRDCPFGNAALLSGLERYEMMRSLWMSACNVT
MKGCKLLAREMPRLNVEVIKDEESDGFQADKVYVYRSVAGPRRDAPPFVLTL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaggctccaaaaaatcgaaattctcgccaccacgaaacttaggcaactcgaaa
gcgtcggttacgttgcactcatcactattcccagatgaagtattggaaaaagtggtgtca
ttcattgattcacacaaggacaggagctcggtctccctggtgtgcaaggactggtataat
gctgaacgctggacaagatcaaagctcttcataggcaactgctattcggtgtctcctgag
attgtggcaagaaggtttccaagaattaagagtgttaccctcaaagggaagccaagattt
tcggatttcaaccttttgcctagagattggggcgctgatgtgcattcttggctggtaatg
ttcgccgaagtttacccctttttggaggaattgagactcaagaggatggctataaatgat
gagagcttggagatcttggcgaaatcttttccaggctttaaagctttgtctctgtgcagt
tgcgatgggttcactaacaaggggctcaaagctatagccacccattgtaggaatttgaca
gaactcgacatacaggacatagcaactgatgacttcagtggagattggctgacttgtttc
cctgaaaacttttcctcactggaaatattaaattttgcatgcctcaacagtgagatcgaa
tttgataagctcgagagacttgtcagtaggtgcagttcattaagtgttctaaaggttaat
gagagtattagtttggaccaactgcaacgtctgcttgtgcttgctcctcagttaaaagag
ctcggcaccggttcctttttcccagaacttacccctcgccagtaccatgaagttgaaagt
gcatttagaaatgtccgaaatcttcaaactctatcaggcttatgggacgccacggcctct
tatctcccagttctttacggaacttgtgcaagtctgagtttcttgaacttgagtgatgct
gcccttcagagtgctgcatttgaaaagcttctcgcccactgtcccaacttacgacgtctt
tgggttgccgataccgtagaggacaaggggttagaggccgttggtttaagatgtcccttg
cttgaagaactccgagttttcccttcagatccttacgaccaacatcaacgtcatggagtg
acagagttaggttttgtagcagtgtctcgtggatgtcgcaaactccattatgtcctttac
ttctgtcggaggatgactaatgctgctgttgagaccatagtaaacaactgccctgatttt
acccacttccgtctttgcataatgaatcctggtgagccagattacctgacaaacgagcct
atggatgaggcctttggttccgttgctaaaacttgcactaaactccagcggctttcagtt
tcggggcttctaacagatctaacctttgagtatattggtaaatatgccaagaatctggag
accctttccgtggcttttgctggaagcagtgatcgtgggatgcaatgtgttcttgaaggt
tgccccaagcttaggaaactcgagataagagattgcccatttggaaatgcggctctgctt
tctgggctcgagagatatgaaatgatgaggtcattgtggatgtcagcttgtaacgtcact
atgaaagggtgcaagctactggcaagggagatgccgaggttaaatgttgaagtgataaaa
gacgaggaaagcgatggcttccaagctgacaaagtttacgtctatcgttcggtagcaggt
ccgaggagggacgccccgccctttgtacttaccctttga
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