Henckelia pumila: 140881399
Help
Entry
140881399 CDS
T11037
Name
(RefSeq) uncharacterized protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
hpum Henckelia pumila
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpum03009
]
140881399
Ribosome biogenesis [BR:
hpum03009
]
Eukaryotic type
90S particles
Other 90S particles
140881399
Pre-60S particles
Other pre-60S particles
140881399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
Radial_spoke_3
ARM_TBCD
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
140881399
NCBI-ProteinID:
XP_073142784
LinkDB
All DBs
Position
2:110134794..110144437
Genome browser
AA seq
1286 aa
AA seq
DB search
MEGVDMEPAHPSEDLCNEILSQFNNPANDHHLHICAAVGAMSQELRDQNLPTTPIAYFGA
TCSSLDRICSSESEPPGHLLDSLTTILSVVLNKLPSVVLKTKYGYLSELLVRVLRVKSVG
VNGVVPGLKCVSRLLVVREKVEWADVALLYGVLLGYITDDRPKVRKQSQSCLHDVLEYLR
LAPGLAPLLTHASEGFTNIFERSLLLAGGSKTNTSEGSKGAQEVLYLLDALKSCLPYMSS
KSSNNVLKYFKTLLELRQPMVTSRITDGLNALCLSSTGEVSGEVLLDLLCSLATSLSSNE
SSADDMTFTARLLETGMKRVYLLNRPICVVKLPVVFNALKDVLASEHEEALVAAVKALKS
LIHACVDENLIQQGVDQITANINVSSRKSGPTVIEKICVTIESVLSYHYAEVWDKSFQIV
STIFDKLGKNSFFFLKETLKSLADMQKLPDGDFPFRKQLHECVGSALCAMGPETFLSLVP
FQLEVQELSEANLWLFPILKQYTVGANLKFFTESILPMVAAMKQKSAMLEQEGKIYSART
VDGIVYSLWSLLPSFCNYPVDMAESFKGLESAVCTVLREEPDISGIMCSSLQILIRQNKR
ILEGKDLSSNNEITIAEERAKALYTSHVAKANLSVLRSSARELLSVLSGVYFKSSKANGG
VLQSTIGELASICDKEVVTRFFKTTMQKLLKVTREAGKSGNSKDSNFMQVDSTSDEKSLS
VARAQLFDLAVSLLPGLDAKEIDLLFVAVQPALKDFDGFVQKKAYRVLSLVFKFSDDFIS
RRHEEVLSLMIEVLPSCHFSAKRYRLDCLFFLIIHASKDGSEQRRQEITSSFLTEIILAL
KEANKKTRNRAYDILVQIGQACGDEDSDGEKDHLYKFFSMVAGGLAGETPHMISASMKGL
ARLAYEFSDLISAAYNVLPATFLLLQRKNKEIIKANLGLLKVLVAKSQAEGLQTHLRSLV
EGLLNWQDSTRNHFKAKVKLLLEMLVKKCGLDAVKEVMPEEHMKLLTNIRKLKERKERTR
SAKTIESRSVVSKATTSRKSGWNHTKIFSDFDEETGSSGDEFADKRSFSSLQSGYSSKLQ
SKASFQSKRKRKAAKSLQEDFLDQLDEDPLDLLDRQKTRSALRSSKVLEKKSESDDEPDI
DAEGRLIIHESGKKEKGNREQKRRLSSDTEVDDRSEAGSLLSASSRKAQKRSKTSDSGWS
YTGKEYASKKAGGDLKRKDKLEPYAYWPLDRKMVSRRPEHRAAARKGMASVVKLTKKLEG
KSVVNALSIRRTVFNKGKKKGNQKKV
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgtggatatggagccggcgcatccatcagaagacttatgcaatgaaattctt
tctcaattcaacaaccccgccaacgaccaccatctccacatatgtgccgccgtcggcgcc
atgtcacaagaactcagagaccaaaatctccccaccacacccatcgcctacttcggcgcc
acgtgctcttcccttgatcgcatatgctcttccgaatccgaaccccctgggcacctcctc
gactccctaacaacaattctttccgtcgtgctaaacaaactgccctctgttgttctcaag
accaagtacggttatttgtctgagcttctggttcgggttctcagagtgaaatctgtgggg
gttaacggtgtcgtgccggggttgaagtgcgtctcaaggttgttggtcgtgagggaaaag
gtcgagtgggctgacgtggcgcttttgtacggtgtcctactcggttacattacggatgat
cggcctaaggttagaaagcaatcacagtcatgtctacacgatgtcttagaatatttacgg
ttagcgcctgggcttgcaccattgttgacacatgcaagtgaaggatttactaatatcttt
gagaggtctcttcttcttgctggtggatcaaagaccaatacttcagaaggttccaaagga
gcacaggaggtcctttatcttcttgatgctcttaaatcctgtcttccatacatgtcgtca
aagtcctcaaacaacgtcttaaagtatttcaagactctgttggagctgagacaacctatg
gttactagtcgcataaccgatggtctgaatgcactctgtctcagttctactggggaagtt
tctggagaagttctacttgatcttttgtgctcactagctacttcgctctctagcaatgag
tcatctgctgatgacatgacatttactgctcgcttgctggaaactgggatgaaaagagtt
tatttgcttaacagaccgatttgtgtggttaagcttccagttgtattcaatgcactaaaa
gatgttttggcttctgaacacgaggaggccttggttgcagcagtgaaagcgcttaagagc
ttaatacatgcgtgcgttgacgaaaacctgatccaacagggtgtcgatcagatcacagcc
aatatcaatgtcagctctaggaagtctggtccgactgtcattgaaaaaatctgtgtaaca
attgaaagtgtgctcagttatcattatgctgaagtctgggacaagtcatttcaaatagta
tcaactatatttgacaaattaggtaaaaattctttcttcttcttaaaggaaacactgaag
agtttagcagacatgcagaagttgcctgatggggacttccctttcaggaaacagttgcat
gagtgtgttggatcagctctttgtgccatggggcctgagacttttttgagtcttgtacct
tttcaattggaagtccaagagctatctgaggccaatctttggctgtttccaattctgaaa
cagtacacagttggggctaatctaaagttttttaccgagtcaattttacccatggttgca
gcaatgaagcagaaatctgccatgcttgagcaagaaggcaaaatttattcagctaggacc
gttgatggaattgtgtactctttgtggtcgctgctaccctcgttttgcaactaccctgtg
gatatggctgaaagtttcaagggtttagagagtgcagtatgtactgttcttcgtgaagaa
ccagatatttctgggattatgtgctccagcttgcagattttaattcgacagaataagaga
attttggaaggaaaagatttaagttcgaacaatgaaatcaccatagcagaagagcgggcc
aaggccttgtacacttcacatgttgcaaaggccaacttgagtgtgttgcgatcctctgct
cgtgagttgttgtctgttctttccggagtgtactttaaatcttctaaagctaatggtggt
gttttgcagagcacaattggtgaacttgcttcaatatgtgataaagaagtggtcacgagg
ttttttaagactacgatgcagaagcttctaaaggtcacccgagaggctggcaagtcaggg
aactccaaagattccaatttcatgcaggttgacagcacatctgatgaaaaatccctgtct
gtagccagggcacagttgtttgacctcgcggtttcacttttgcctggcttggatgccaag
gaaattgatcttctctttgttgctgttcaacctgcattgaaggatttcgatggcttcgtt
cagaaaaaggcttacagagtgctttctttggtgtttaagttctctgatgactttatttca
agaaggcatgaagaggtgttgagtttgatgattgaagtgctgccctcttgtcatttttca
gctaaacgctacagacttgactgtttattcttcttgatcatccatgcttctaaggatgga
tctgaacagagaaggcaggaaattactagttctttccttactgaaatcatactcgcattg
aaagaggctaataagaaaacaagaaatagagcttatgacattctagtccagattggtcag
gcatgtggtgatgaagatagcgatggcgaaaaggatcatttatacaaattctttagcatg
gttgctgggggcctcgctggtgagacccctcatatgatcagtgcttctatgaagggctta
gctcgcttggcttatgagttctctgatctgatctctgccgcgtacaatgttcttcctgct
acatttctcctcctgcaaaggaaaaacaaagaaataattaaggctaatttaggattgctg
aaagtattggtggccaagtcgcaagctgaaggcttgcagacacacttgcgaagcttggtc
gaaggtctgctgaattggcaagatagcactagaaatcatttcaaggctaaggttaaatta
ctccttgaaatgcttgtcaagaaatgtggactggatgccgtgaaggaagtcatgcctgaa
gagcatatgaaacttctgactaacataagaaagctcaaggagcgaaaagagaggacaaga
tctgctaaaactatagaaagcaggtccgttgtatcgaaagcaactacatccaggaaaagt
ggttggaatcatacaaaaatattttctgattttgacgaggaaacagggagcagtggtgat
gaatttgctgataaaagaagtttttccagccttcagagtgggtattcatcaaagttgcaa
tccaaagcttcttttcaatccaagagaaaacgtaaagcagcaaagagcttgcaagaagac
ttcctagaccaattagatgaggatccccttgacttgcttgatcgtcagaagacacggtct
gctcttagatcatcaaaggtacttgagaagaagtctgagtcagacgatgaaccagacata
gacgctgaagggcgtctaatcattcacgagagtggaaagaaagaaaagggaaatagggaa
cagaaacgaaggttgtcctctgacactgaggtagatgataggagtgaagctggaagtctt
ttgtctgcaagctcgaggaaagctcaaaagcggagtaaaacatcggattctgggtggtca
tacacgggtaaggagtatgctagcaaaaaggcaggtggtgatttaaagaggaaggacaag
cttgaaccttacgcatactggccacttgaccgtaaaatggtgagccgaagacccgagcat
cgggcagctgccaggaaaggaatggcaagtgtagttaagttaaccaagaagctagaaggg
aaaagtgttgttaatgctctttccattagaagaactgtgttcaacaagggcaaaaagaaa
ggcaaccagaaaaaagtttga
DBGET
integrated database retrieval system
