Henckelia pumila: 140881907
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Entry
140881907 CDS
T11037
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
hpum Henckelia pumila
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpum03400
]
140881907
Enzymes [BR:
hpum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
140881907
DNA repair and recombination proteins [BR:
hpum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
140881907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_30
DEXQc_Suv3
AAA_19
T2SSE
Peptidase_M13_N
Motif
Other DBs
NCBI-GeneID:
140881907
NCBI-ProteinID:
XP_073143681
LinkDB
All DBs
Position
2:133598190..133636902
Genome browser
AA seq
2084 aa
AA seq
DB search
MLAELPRLTNSLRLPFDVDQAYLNRKSLLRTLKTSSSAALHGEWELARKIVYQWDEASAE
VRQAYKQYIAAVVELMGGEVVSEEFHEVALYIYHLFDFTSDNKDGESGNRVSDKKFELEK
FIGHAVLDANIQKVASLVDRLSGLQKKEQRAMNIPELTSVDGEELEFGSDLVFQPPARFL
VDFALEHGEIPVDETSTSFSQPEGWPDYGGPAIVRSLNEGNFGLEWLRDACEKIVSESTS
HFPRDELAMTICQVLDSEKPGDEIAGDLLDLVGDGSFEIVQDLIMHRKELVESIHRGLLV
LKSDKSVSSMQPRMPSYATQVTVQTESERQIDKFRRKEEKRNRRGTDHATENDFSSLAFS
SLLQASEKKNLFDDLVGYGDGPQLAATALPQGTVRKHYKGYEEVTVPATPTAPMKPGEKL
IEIKELDDFAQAAFRGYKSLNRIQSRIYQKTYFSNENILVCAPTGAGKTNIAMISILHEI
GQHLRDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNIIVRELTGDMQLSKNELEE
TQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVEST
QSMIRIVGLSATLPNYLEVAQFLRVNPDTGLFFFDSSYRPVPLEQQYIGISEPNFVARKE
LMNEICYKKVVDSIRQGHQVMVFVHSRKDTGKTAENLVEMAKRYEDFELFSNTSHPQSGL
IKKEVLKSRNRELVQLFDYAIGIHHAGMLRVDRGLTERLFSDGLLRVLVCTATLAWGVNL
PAHTVVIKGTQIYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAHYLR
LLTSQLPIESQFINSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMKMNPLAYGIGWD
EVIADPSLSLKQRSLVSDSARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETY
NEMLKRHMNDSEVIDMVAHSTEFENIVVREEEQNELEMMTRKCPLEVKGGPSNKHGKISI
LIQMYISRGSIDTFSLVSDAAYISSSLARVMRALFEICLRRGWSEMSSFMLEYCKAVDRQ
IWPYQHPLRQFDKDISAEILRKLEEREVDLDRLYEMQEKDIGALIRYAPGGKLVKQYLGY
FPMVQLLATVSPITRTVLKVDLIVTPEFVWKDRFHGTVQRWWILVEDSENDHIYHSELFS
LTKRMAKGDPQKLSFTVPIFEPHPPQYIIRAISDSWLHAEAFYIISIQNLALPEAHTTHT
ELLDLKPLPVTALSNRTYEALYNFSHFNPIQTQAFHVLYHTDQNVLLGAPTGSGKTISAE
LAMLHLFNTQPDMKVIYIAPLKALVRERMNDWRKRLVSKLGKQMVEMTGDYTPDMTALLS
TDIIISTPEKWDGISRNWHSRGYVKKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQT
DRPVRFVGLSTALANAHDLADWLGVEENGLFNFKPSVRPVPLEVHIQGYPGKYYCPRMNS
MNKPTYAAICTHSPLKPVLIFVSSRRQTRLTALDLIQFAASDERPRQFLAMPEEALQMLL
SQVADQNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLV
IIKGTEYFDAKAKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEP
FPVESSLKEQLHDHINAEIVSGTICHKEDAVHYLTWTYLFRRLGVNPAYYGLEDTDSGTL
SSYLSRLVLNTFEDLEDSGCIKIDEDKVESMMLGSIASQYYLKYTTVSMFTSNIGADTSL
EVFLHILAGASEYDELPVRHNEENHNADLSNKVRFMVDQSLLDDPHVKANLLFQAHFSRV
ELPITDYVTDLKSVLDQSIRIIQAMIDLCANSGWFSSTMTCMRLLQMVMQGLWFDRDSPF
WMLPCMTDDLITTLNQRGFLNVQQLLHLPKANFQALTGIATASRLHEEVQHFPRIQARIK
VQRGHSDDSRVSLNIRLEKTHSQRKTARAFTPRFPKVKDEAWWLVLGNTSTSELYALKRV
SFNDVLQIRMDVPSNVNDFQGMKLVIVSDCYIGFEHEYSVEALV
NT seq
6255 nt
NT seq
+upstream
nt +downstream
nt
atgttggccgagctcccgcgcttaaccaattcacttcgactgccttttgatgtcgatcaa
gcttatctcaatcgaaaatcccttctcagaaccctcaagacctctagttccgcggctttg
catggagagtgggagcttgctcgtaagattgtgtatcaatgggacgaagcatctgctgag
gtacggcaagcatacaaacaatatattgctgcagtcgtggagttgatgggtggtgaggtc
gtgtcagaggaatttcatgaagtggcattgtatatttatcatctatttgactttacctct
gacaacaaagatggtgagagcggcaatagggtttctgataaaaagtttgagttggaaaaa
tttattggccatgctgttctggatgcaaatatacaaaaagttgcatctctggtagataga
ctttctggtttacagaagaaggagcagagggccatgaatattcctgaattgacgagtgta
gatggcgaggagttggaatttggttcagaccttgttttccaacctcctgcccggtttcta
gttgattttgccttggagcatggagaaatcccagtggatgaaactagcacatctttttct
caacctgagggatggcctgattatggtggtccagcaatcgttcgttctcttaatgaaggc
aactttggtctagaatggttgcgggatgcatgtgagaaaattgttagtgaaagcacttca
catttccctcgagatgaactggcaatgaccatttgccaggttcttgactcagagaaaccg
ggtgatgagatagctggtgatttgctggatcttgtcggtgatggctcgtttgaaattgtt
caagaccttatcatgcatagaaaagaacttgttgaaagtattcaccgtggacttcttgta
ctcaaatccgacaaatcagtctcaagcatgcaaccaaggatgcctagttacgctactcag
gtaactgtacaaacagagtctgaacgacaaattgataagtttcgtcgcaaggaggaaaaa
agaaataggcgtgggactgaccatgccacggagaatgatttttcgtctctggcatttagt
tccttgcttcaagcaagtgagaagaaaaacctttttgatgatcttgttggatatggtgat
gggcctcagcttgctgcaactgcccttcctcagggcacggttagaaagcattataaggga
tatgaagaagtcactgttcctgccacacctactgcaccgatgaaacctggggagaagctg
attgaaataaaggagttagatgattttgcacaagctgctttccgtggatacaaatctttg
aatcgcatccagagcagaatataccaaaaaacttacttcagtaacgaaaatatactggtc
tgtgctccaactggagctggaaaaacaaatatagccatgatatctattctgcatgagata
ggacaacacttaagagatggctatttacacaaggatgaatttaagattgtttatgttgct
cctatgaaggcattagctgcagaggttacgtcaacgtttagtcatcgcttgtctccacta
aacataatcgtgagagaacttactggtgacatgcaactttctaaaaatgaacttgaagaa
actcagatgattgtgacaacgcctgaaaagtgggatgttatcactcgtaaaagtagtgac
atgtctctatctatgctagtgaagctcctaatcattgatgaagtacatctcttgaatgat
gataggggtcctgtaatagaggcattagtagctcgcactcttcgtcaggtcgagtcaaca
caaagtatgattcgtatagttggactctctgccactctaccgaattatttggaggttgca
caatttttgagggtaaatccagatacaggtctattcttttttgattcaagctaccgccca
gttcctttggagcagcaatatattggtatttctgaaccgaattttgtagctcgcaaggaa
ttgatgaatgagatatgctacaagaaggttgttgattcaataaggcaagggcatcaggtt
atggtttttgttcattcacggaaagataccggaaaaacggctgaaaacctggttgaaatg
gccaagagatacgaggatttcgagcttttttcaaatacttctcatccacagtcgggactt
attaagaaagaagttctgaagtccaggaacagggagctggtccaactctttgactatgct
attggcatccatcatgctgggatgttgcgtgttgacagaggactgactgagcgacttttc
tctgatggacttttaagggtccttgtttgcacagcgactttggcatggggagtaaatctg
ccagctcacacggtggtgattaagggaactcaaatatatgatccaaaggctggtgggtgg
agagatctgggcatgcttgatgttatgcagatatttgggcgtgctgggagaccgcagttc
gataaaagtggcgaaggaattataatcacaagccatgacaaactagctcactatttgcga
cttttgaccagtcaacttcccatcgagagtcagtttattaattccttaaaagataatttg
aatgcggaggtggcactaggcactgtaacaaatgttaaagaagcctgtgcctggcttggg
tatacatatcttttcataaggatgaaaatgaatcctttggcatatggcattggatgggat
gaggtgattgctgatccttcactgagtttaaagcaaaggtctctggtctctgattctgca
cgtgctcttgacaaggcgaaaatgatgcgctttgatgagaagagcggaaatttttattgt
accgaacttggtcgtatcgcaagccacttttatatccaatactccagtgttgaaacttat
aatgaaatgttgaaacgccacatgaatgacagcgaggtgatcgacatggttgcccattct
actgaatttgaaaacattgttgttcgagaggaggaacaaaatgagcttgaaatgatgact
cgcaaatgtcctttagaagttaagggtggtccatcaaataaacatgggaaaatttcgatt
cttattcagatgtacatatccaggggttcaattgatactttctcactagtttctgatgca
gcatatattagttcaagcttggctcgtgttatgcgggccttatttgagatttgtttgcgt
agagggtggagtgagatgtcttctttcatgttagagtactgcaaggccgtggatcgtcaa
atttggccctaccaacatcctcttagacaatttgataaagatatttctgcggaaattcta
aggaagctcgaggaaagagaagtggacctagatcgcctatatgagatgcaggagaaagac
ataggagctttgattcgctatgctcctggagggaagttggtgaaacaatacttgggatat
ttcccaatggttcagttattagccacagtcagtccaatcactagaactgttttgaaggtt
gatttgattgttacccctgagtttgtctggaaggatcggtttcatggtactgtccagcgc
tggtggattttagtggaggattctgagaatgatcatatatatcactcggagctcttttca
ttaacaaagcgcatggccaaaggggatcctcagaaactatctttcacagttcctatcttt
gagccacaccctcctcagtacatcattcgagcaatttcagattcgtggttgcatgcagag
gctttctacatcatatcaattcagaaccttgcactgcctgaggcacatactactcatacc
gaactccttgatctgaaaccccttcctgtgactgcgcttagcaatagaacctatgaagcg
ttgtataacttctcacactttaaccccatacagacacaggctttccatgtgctgtatcac
actgatcaaaatgttcttttgggagctccgacaggaagtggtaaaaccatatcagccgag
cttgcaatgcttcatctgtttaatactcaacctgatatgaaggtcatctatatagcacct
ttgaaggctcttgttcgagaaagaatgaatgattggaggaagcgtcttgtttcaaaactt
ggaaaacagatggttgaaatgactggtgattataccccagacatgacagctcttttatcg
acggacattataatatctactcctgaaaagtgggatggcattagtcgcaattggcacagt
cgaggttatgtcaagaaggtcgggcttatgatattggacgagattcacttgcttggtgct
gatcgtggacccatattggaggttattgtctccaggatgagatacatatcatctcagaca
gatcgtccagttcgatttgttggcctttcaacagcattggcaaatgcacatgatttagct
gattggcttggtgttgaagaaaatggtcttttcaattttaagcctagtgttagacctgtt
cctcttgaagttcatatacagggatatcctgggaagtattactgcccaagaatgaatagc
atgaacaagccaacatatgctgccatatgtacccattcacccttaaaaccagttcttata
tttgtttcatcacgtcgccagacaagactgactgcacttgaccttattcagtttgcagct
tcagatgagcgcccaagacaattcctggcaatgcccgaagaagcacttcagatgctactt
tctcaagttgctgatcagaatctcaggcatactctgcagtttggcattgggttgcaccat
gctgggctgaatgataaggacagatctcttgttgaggaactttttgcgaacaacaaaatc
caggtattggtttgcaccagtacattagcatggggtgtgaaccttccagcccatttagtt
attataaagggaacggaatattttgatgcaaaagcaaagagatatgtcgattttccaata
acagatattttacaaatgatgggtcgagcaggtcggcctcagtatgatcaacatgggaag
gcagttattctggttcatgaaccaaaaaagagcttctacaaaaagtttctctacgaacca
tttccagttgaaagcagcctgaaagagcagttgcatgatcacatcaatgctgagatagtt
tctggaacaatttgtcacaaagaggatgcagtacattatcttacatggacctatttgttc
cgcagactgggggttaatccagcttattatggattagaggatacagattctggaacttta
agttcttacttgtcaaggttagtgctgaacacgttcgaggatcttgaagacagtggttgc
atcaagattgatgaagacaaggttgagtcaatgatgttggggtcaatagcatctcagtat
tatctgaaatacacgactgtgtcaatgtttacttcaaatataggagcagacacatcgctt
gaagttttcctacatatattagctggtgcttctgaatatgatgagcttcctgtgcggcat
aatgaagaaaatcataatgccgacttatccaacaaagttcgattcatggtcgatcaaagt
cttcttgatgatccacatgttaaagcaaatcttcttttccaggctcatttttcccgagtt
gaactacccatcaccgactatgtaacagacttgaagtcagtgctagatcagagtattcgt
atcattcaggcgatgatagatctttgtgctaacagtggatggttctctagtaccatgact
tgtatgcgtcttttacaaatggtcatgcagggactatggtttgacagagattctcccttc
tggatgttaccatgcatgacggatgatcttattactacattgaaccagagaggattctta
aatgtccagcaattgttgcatcttcccaaagcaaattttcaagctctcactggaattgca
actgcctcaaggttacatgaggaagtgcagcattttcctcgtattcaagctcggataaaa
gttcagagagggcattctgacgattctcgtgttagtctgaacataagattggagaaaaca
cactcccaaaggaaaacagcaagggcttttactcctcgcttcccaaaggtaaaagacgaa
gcatggtggttggtcctgggaaatacttctacttctgaattatatgcgttgaagagagtt
tctttcaatgatgttttacagatacggatggatgttccttctaatgttaatgacttccag
ggtatgaagttggttatagtttcagactgttatattggtttcgaacacgagtactctgtt
gaagcactggtatga
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integrated database retrieval system
